TABLE 2.
Total no. of genes in set | No. of tested genes in seta | Gene set statisticb | Gene set P valuec | Gene set description |
---|---|---|---|---|
156 | 100 | 1.903920114 | 1.46E−28 | Xenobiotic metabolic process |
137 | 99 | 1.620075009 | 2.68E−12 | Response to nutrient |
41 | 24 | 2.680057789 | 1.21E−11 | Secondary metabolic process |
14 | 10 | 3.896239669 | 1.23E−10 | Glycoside metabolic process |
91 | 55 | 1.879901718 | 1.95E−10 | Terpenoid metabolic process |
8 | 6 | 5.132219556 | 3.30E−10 | Aminoglycoside antibiotic metabolic process |
8 | 6 | 5.132219556 | 3.30E−10 | Daunorubicin metabolic process |
8 | 6 | 5.132219556 | 3.30E−10 | Doxorubicin metabolic process |
80 | 48 | 1.962377737 | 4.01E−10 | Diterpenoid metabolic process |
110 | 69 | 1.72724906 | 4.74E−10 | Isoprenoid metabolic process |
60 | 42 | 2.044646234 | 6.84E−10 | Tetrapyrrole metabolic process |
9 | 7 | 4.598087516 | 7.69E−10 | Polyketide metabolic process |
12 | 7 | 4.582972329 | 8.76E−10 | Flavonoid metabolic process |
39 | 28 | 2.353678461 | 1.09E−09 | Porphyrin-containing compound metabolic process |
101 | 68 | 1.701032533 | 2.89E−09 | Unsaturated fatty acid metabolic process |
88 | 60 | 1.758042245 | 4.39E−09 | Icosanoid metabolic process |
88 | 60 | 1.758042245 | 4.39E−09 | Fatty acid derivative metabolic process |
76 | 46 | 1.912375696 | 8.92E−09 | Retinoid metabolic process |
94 | 67 | 1.668312943 | 2.07E−08 | Cellular hormone metabolic process |
10 | 9 | 3.494980169 | 1.01E−07 | Xenobiotic catabolic process |
35 | 22 | 2.346522543 | 1.86E−07 | Drug metabolic process |
21 | 14 | 2.747511772 | 3.61E−07 | Retinoic acid metabolic process |
23 | 17 | 2.498626389 | 7.22E−07 | Quinone metabolic process |
9 | 6 | 3.99034837 | 9.37E−07 | Omega-hydroxylase P450 pathway |
6 | 5 | 4.310759589 | 1.04E−06 | Porphyrin-containing compound catabolic process |
6 | 5 | 4.310759589 | 1.04E−06 | Tetrapyrrole catabolic process |
6 | 5 | 4.310759589 | 1.04E−06 | Heme catabolic process |
6 | 5 | 4.310759589 | 1.04E−06 | Pigment catabolic process |
67 | 46 | 1.756731978 | 1.40E−06 | Regulation of smooth muscle cell proliferation |
Tested genes are those in the gene set for which a gene statistic has been submitted.
Mean −log10 value of the tested genes in the gene set.
P value corresponding to the gene set statistic.