TABLE 2.
Patient | Site | No. of sequences |
||||
---|---|---|---|---|---|---|
RNA env | DNA env | RNA nef | DNA nef | DNA pol | ||
C01 | Cerebellum | 0 | 0 | 0 | 0 | NAa |
Frontal cortex | 0 | 0 | 0 | 0 | NA | |
Basal ganglia | 0 | 0 | 0 | 0 | NA | |
Meninges | 0 | 0 | 0 | 0 | NA | |
Occipital lobe | 1 | 0 | 1 | 0 | NA | |
Liver | 0 | 0 | 0 | 0 | NA | |
Lymph node (tumor) | 0 | 0 | 0 | 0 | NA | |
Lung | 0 | 3 | 0 | 3 | NA | |
C02 | Cerebellum | 29 | 34 | 30 | 31 | 14 |
Frontal cortex | 0 | 17 | 0 | 16 | 16 | |
Temporal lobe | 0 | 6 | 0 | 6 | NA | |
Meninges | 0 | 2 | 0 | 2 | NA | |
Occipital lobe | 0 | 20 | 0 | 17 | 10 | |
Lymph node (tumor) | 18 | 22 | 18 | 22 | 14 | |
Spleen | 0 | 0 | 0 | 0 | NA | |
Colon | 0 | 0 | 0 | 0 | NA | |
Kidney | 0 | 0 | 0 | 0 | NA | |
Lung | 0 | 16 | 0 | 19 | NA | |
C03 | Kidney | 0 | 0 | 0 | 0 | NA |
Liver | 0 | 0 | 0 | 0 | NA | |
C04 | Cerebellum | 0 | 0 | 0 | 0 | NA |
Basal ganglia | 0 | 0 | 0 | 0 | NA | |
Aorta | 0 | 0 | 0 | 0 | NA | |
Kidney | 0 | 0 | 0 | 2 | NA | |
Colon | 0 | 9 | 0 | 9 | 1 | |
Lung | 0 | 26 | 0 | 18 | 8 | |
C05 | Frontal cortex | 0 | 0 | 0 | 0 | NA |
Temporal lobe | 0 | 0 | 0 | 1 | NA | |
Basal ganglia | 0 | 1 | 0 | 1 | NA | |
Liver (tumor) | 0 | 0 | 0 | 0 | NA | |
Lymph node | 22 | 21 | 15 | 8 | 9 | |
Spleen | 17 | 25 | 15 | 10 | 9 | |
Kidney | 0 | 3 | 0 | 8 | 7 | |
Pancreas | 0 | 2 | 0 | 7 | NA | |
Aorta | 0 | 0 | 0 | 0 | NA |
NA, not applicable.