TABLE 1.
Isolate | Origin | Transmission | Clade | Coreceptor | Infection | Tier | V1/V2 length | No. of predicted N-linked glycans per protomere | GenBank accession number | PubMed identifier |
---|---|---|---|---|---|---|---|---|---|---|
BG505.c2 | NBTa | MTCTb | A | R5 | Acute | 2 | 17/46 | 24 | ABA61516.1 | 16378985 |
MG505.e1 | NBT | M-Fc | A | R5 | Chronic | NCf | 17/46 | 27 | ABA61511.1 | 16378985 |
BF520.e3 | NBT | MTCT | A | R5 | Acute | 2 | 17/41 | 28 | KX168096 | 27345369 |
BS208.b1 | NBT | MTCT | A | R5 | Acute | 2 | 13/42 | 22 | KX364401 | 16378985 |
PVO.4 | Italy | M-Md | B | R5 | Acute | 2/3 | 29/48 | 32 | AAW64259.1 | 16051804 |
KNH1144 | Discarded blood units from Kenyatta National Hospital | Unknown | A | R5 | Chronic | NC | 28/44 | 27 | AAN03143.1 | 12218394 |
NBT, Nairobi Breast Feeding Clinical Trial.
MTCT, mother-to-child-transmission.
M-F, male-to-female transmission.
M-M, male-to-male transmission.
Predicted using Los Alamos HIV sequence database N-GlycoSite software.
NC, not characterized.