Table 1.
Sedimentation equilibrium analytical ultracentrifugation of Sdk fragments. KD = dissociation constant. KI = isodesmic constant. The KI/KD ratio is given when it is less than two, indicating the presence of non-specific binding.
Protein | Oligomeric state | Dimerization KD (μM, n=2) |
---|---|---|
Sdk1 | ||
Ig1–4 | Dimer | 10.5 ± 1.1 |
Ig1–5 | Dimer | 4.6 ± 0.06 |
Ig1–6 | Dimer | 2.3 ± 0.39 |
Ig1–2 dimer interface mutations | ||
Ig1–4 N22R | Monomer | N/A |
Ig1–4 K133E | Weak non-specific dimer | 204 ± 38.9 (KI/KD = 1.24) |
Ig1–4 L29M/E168D | Dimer | 4.26 ± 0.50 |
Ig1–6 N22R | Monomer | 650 ± 66 (KI/KD = 1.05) |
Ig3–4 dimer interface mutation | ||
Ig1–4 N253E | Dimer | 15.5 ± 1.64 |
Sdk2 | ||
Ig1–4 | Dimer | 2.2 ± 0.4 |
Ig1–5 | Dimer | 0.73 ± 0.036 |
Ig1–6 | Dimer | 0.44 ± 0.012 |
Ig1–2 dimer interface mutations | ||
Ig1–4 H18R/N22S | Monomer | N/A |
Ig1–4 N22S | Monomer | N/A |
Ig1–4 N22R | Monomer | N/A |
Ig1–6 H18R/N22S | Monomer | N/A |
Ig3–4 dimer interface mutation | ||
Ig1–4 N253E | Dimer | 18.9 ± 0.95 |
Chimera | ||
Sdk2Ig1–2/Sdk1Ig3–4 | Dimer | 3.92 ± 0.17 |