Table 2. Deregulated miRNAs in both miRNA-Seq and TaqMan PCR analyses.
miRNA | miRNA-Seq logFC |
P-value | miRNA | TLDA logFC |
P-value |
---|---|---|---|---|---|
let-7a-2 | 0.8844 | 0.0025 | let-7a | 2.3601 | 0.000* |
let-7a-3 | 0.4856 | 3.2638E-264 | let-7a | 2.3601 | 0.000* |
miR-15b | 0.9831 | 0.0004 | miR-15b | 2.4022 | 0.000* |
miR-200b | 1.0898 | 0.0072 | miR-200b | 1.9404 | 0.000* |
miR-21 | 1.5219 | 0.0028 | miR-21 | 2.6311 | 0.001* |
miR-155 | 1.3089 | 0.0029 | miR-155 | 1.3294 | 0.010* |
miR-486 | −1.635 | 0.0004 | miR-486 | −3.9434 | 0.084 |
miR-181a-1 | −1.1444 | 0.0006 | miR-181a | −0.8625 | 0.140 |
miR-181a-2 | −1.1145 | 0.0002 | miR-181a | −0.8625 | 0.140 |
let-7g | 0.8879 | 0.0015 | let-7g | 0.3918 | 0.143 |
miR-26b | 1.0565 | 0.0009 | miR-26b | 0.5597 | 0.224 |
miR-218-1 | −1.6175 | 0.0001 | miR-218 | −1.4699 | 0.386 |
miR-886 | −1.3187 | 0.0046 | miR-886-3p | −1.1746 | 0.482 |
miR-425 | 1.6206 | 0.0076 | miR-425-5p | 0.1190 | 0.906 |
Test sample set: p ≤ 0.01 and FDR ≤ 0.1, as determined by EdgeR software.
Validation sample set: p ≤ 0.01 as determined by Expression Suite software.
Statistically significantly deregulated miRNAs identified in both test and validation sets by transcriptome sequencing and TaqMan PCR analyses.