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. 2016 Oct 3;2:16068. doi: 10.1038/cddiscovery.2016.68

Figure 3.

Figure 3

Quality and representativity of OPLS-DA models for different sets of proteins trained on proteomics data from H1299 cells treated with five drugs. (a) Normalized quality and representativity of different sets of proteins. The 95% confidence area for random sets is shown in gray. The circle sizes are proportional to the sizes of the protein sets. (b) Scatter plot of the OPLS-DA models’ Q2 values versus the median CV of protein abundances used in the model.