Table 1. Summary statistics for 454 sequencing of 16S rRNA genes from P. placomus.
Sample | Raw reads | Filtered reads | No. reads subsampled | Observed OTUs | Effective # of species | Shannon index | Chao1 richness | ACE richness | Simpson evenness |
---|---|---|---|---|---|---|---|---|---|
NF12.19Q1 | 4,393 | 4,300 | 4,300 | 105 | 54 | 3.98 | 107.80 | 108.20 | 0.0574 |
NF12.19Q2 | 7,577 | 7,268 | 4,300 | 107 | 36 | 3.58 | 117.91 | 115.17 | 0.0468 |
NF12.19Q5 | 6,197 | 5,635 | 4,300 | 168 | 97 | 4.57 | 170.36 | 173.47 | 0.0305 |
NF12.19Q6 | 404 | 262 | – | – | – | – | – | – | – |
NF12.19Q7 | 428 | 389 | – | – | – | – | – | – | – |