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. 2016 Oct 3;11(10):e0161225. doi: 10.1371/journal.pone.0161225

Fig 5. Maximum Likelihood tree of S. Kentucky ST152/318/2132 genomes based on SNPs detected by Lyve-SET.

Fig 5

Bovine-associated strains are labeled in blue, poultry-associated strains are labeled in red, and the human clinical isolate CDC 191 is labeled in black. Tree was inferred using the General Time Reversible model of nucleotide substitution in RAxML with 1000 bootstrap replicates and rooted in twelve S. Kentucky ST198 genomes. Bar = number of substitutions per site.