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. 2016 Oct 3;11(10):e0161225. doi: 10.1371/journal.pone.0161225

Fig 9. Maximum Parsimony tree of S. Kentucky ST198 isolates collected from human clinical cases (cluster 198.2) and dairy cows and food products in North America (198.1).

Fig 9

The tree was inferred from an alignment of SNPs detected among all S. Kentucky ST198 genomes and using the chromosome of S. Kentucky CVM29188 as a reference. The tree is based on 42,958 SNPs (Parsnp analysis), of these, 532 SNPs were identified among the ST198 genomes. The tree displayed here is rooted in the distantly related S. Kentucky CVM29188. Tree was inferred with 1000 bootstrap replicates. Bar length = number of substitutions.