Table 1.
Chloroplast factors interacting with virus nucleic acids or proteins.
| Plant Virus* | Virus components | Chloroplast factors | Subcellular localization | Biological process | References |
|---|---|---|---|---|---|
| ssRNA POSITIVE-STRAND VIRUSES | |||||
| Potexvirus/Alphaflexiviridae | |||||
| Alternanthera mosaic virus (AltMV) | TGB3 | Chloroplast membrane | Chloroplast | Cell-to-cell movement, long-distance movement, symptom | Lim et al., 2010 |
| PsbO | Surrounding chloroplast | Symptom | Jang et al., 2013 | ||
| Bamboo mosaic virus (BaMV) | RNA 3′ UTR | cPGK | Chloroplast Cytoplasm, | Replication | Cheng et al., 2013 |
| Potato virus X (PVX) | CP | Plastocyanin | Chloroplast | Symptom | Qiao et al., 2009 |
| Alfamovirus/Bromoviridae | |||||
| Alfalfa mosaic virus (AMV) | CP | PsbP | Cytoplasm | Replication | Balasubramaniam et al., 2014 |
| Cucumovirus/Bromoviridae | |||||
| Cucumber mosaic virus (CMV) | 1a, 2a | Tsip1 | Cytoplasm | Replication | Huh et al., 2011 |
| Cucumber mosaic virus Y strain satellite RNA (CMV-Y-sat) | 22-nt vsiRNA** | ChlI mRNA | Cytoplasm | Symptom | Shimura et al., 2011; Smith et al., 2011 |
| Potyvirus/Potyviridae | |||||
| Potato virus Y (PVY) | CP | RbCL | – | Symptom | Feki et al., 2005 |
| HC-Pro | MinD | Cytoplasm | Symptom | Jin et al., 2007 | |
| CF1β | Chloroplast | Symptom | |||
| Onion yellow dwarf virus (OYDV) | P3 | RbCL, RbCS | – | – | Lin et al., 2011 |
| Plum pox virus (PPV) | CI | PsaK | – | Host defense | Jimenez et al., 2006 |
| Sugarcane mosaic virus (SCMV) | HC-Pro | Fd V | Cytoplasm | Symptom | Cheng et al., 2008 |
| Soybean mosaic virus (SMV) | P1 | Rieske Fe/S | – | Symptom | Shi et al., 2007 |
| P3 | RbCL, RbCS | – | – | Lin et al., 2011 | |
| Shallot yellow stripe virus (SYSV) | P3 | RbCL, RbCS | – | – | Lin et al., 2011 |
| Turnip mosaic virus (TuMV) | CP | 37-kD protein | – | – | McClintock et al., 1998 |
| P3 | RbCL, RbCS | – | – | Lin et al., 2011 | |
| Tobacco vein-mottling virus (TVMV) | CI | PsaK | – | Host defense | Jimenez et al., 2006 |
| Dianthovirus/Tombusviridae | |||||
| Red clover necrotic mosaic virus (RCNMV) | MP | GAPDH-A | Chloroplast, Endoplasmic reticulum | Cell-to-cell movement | Kaido et al., 2014 |
| Pomovirus/Virgaviridae | |||||
| Potato mop-top virus (PMTV) | TGB2 | Chloroplast lipid | Chloroplast | Replication | Cowan et al., 2012 |
| Tobamovirus/Virgaviridae | |||||
| Tobacco mosaic virus (TMV) | 126 K replicase | PsbO | – | Host defense | Abbink et al., 2002 |
| NRIP | Cytoplasm, Nucleus | Host defense | Caplan et al., 2008 | ||
| 126 K/183 K replicase | AtpC | VRCs | Host defense | Bhat et al., 2013 | |
| RCA | VRCs | Host defense | |||
| MP | RbCS | Cytoplasm | Cell-to-cell movement | Zhao et al., 2013 | |
| Tomato mosaic virus (ToMV) | CP | Fd I | Cytoplasm | Symptom | Sun et al., 2013; Ma et al., 2008 |
| IP-L | Thylakoid membrane | Long distance movement | Li et al., 2005; Zhang et al., 2008 | ||
| MP | RbCS | Cytoplasm | Cell-to-cell movement | Zhao et al., 2013 | |
| ssRNA NEGATIVE SENSE VIRUSES | |||||
| Tenuivirus/Unassigned | |||||
| Rice stripe virus (RSV) | SP | PsbP | Cytoplasm | Symptom | Kong et al., 2014 |
| ssDNA VIRUSES | |||||
| Begomovirus/Geminiviridae | |||||
| Abutilon mosaic virus (AbMV) | MP | cpHSC70-1 | Cell periphery, Chloroplast | Cell-to-cell movement | Krenz et al., 2010, 2012 |
| dsDNA VIRUSES | |||||
| Caulimovirus/Caulimoviridae | |||||
| Cauliflower mosaic virus (CaMV) | P6 | CHUP1 | VRCs | Cell-to-cell movement | Angel et al., 2013 |
*
Virus taxonomy is in format of Genus/Family.
**
Virus-derived small interfering RNA.
– Not addressed. ssRNA, single-stranded RNA; ssDNA, single-stranded DNA.