Table 3.

Results for the top 10 nuclear SNPs on chromosome 3 according to p value for interaction with rs2853495, sorted by chromosomal positions

Chra	Nuclear SNP	BPb	A1c	p			Gene
				Nucleard	Mitoe	Interactionf
3	rs7620175	35155767	T	6.58⋅10−02	4.25⋅10−01	8.47⋅10−06	LOC101928135
	rs12493494	60412390	T	1.41⋅10−03	4.37⋅10−06	1.57⋅10−05	FHIT
	rs505014	62731917	G	2.12⋅10−04	1.11⋅10−01	5.78⋅10−05	CADPS
	rs498746	62731985	T	2.64⋅10−04	1.48⋅10−01	9.26⋅10−05	CADPS
	rs4676732	121314320	T	2.74⋅10−02	9.31⋅10−02	6.99⋅10−05	FBXO40
	rs6784995	122938098	A	7.04⋅10−04	9.13⋅10−07	3.37⋅10−05	SEC22A
	rs9289215	122962809	A	2.72⋅10−03	1.37⋅10−06	8.36⋅10−05	SEC22A
	rs6784930	123001494	A	1.76⋅10−02	1.21⋅10−06	1.03⋅10−05	ADCY5
	rs17809756	159630084	A	4.30⋅10−06	7.33⋅10−01	7.79⋅10−06	Near SCHIP1, ILI2A
	rs6800685	190139275	T	5.61⋅10−02	2.10⋅10−01	1.12⋅10−05	Near CLDN16, TMEM207

^aChromosome; ^bBase-pair position according to UCSC version hg19; ^cMinor allele; ^dMain effect of nuclear SNP; ^eMain effect of mitochondrial SNP; ^fInteraction term