Table 3.
Identification of C4-interacting partners from healthy tomatoes by NCBI using sequence similarity based on BLASTn
| NCBI accession No. | Gene BLASTn |
|---|---|
| C4 interaction partners in healthy tomatoes | |
| XM_004233057.2 | PREDICTED: Solanum lycopersicum 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic (LOC101267959), mRNA |
| XM_004252922.2 | PREDICTED: Solanum lycopersicum DEAD-box ATP-dependent RNA helicase 42 (LOC101254580), transcript variant X3, mRNA |
| XM_015209601.1 | PREDICTED: Solanum pennellii ribulose bisphosphate carboxylase small chain 2C, chloroplastic (LOC107010325), mRNA |
| NM_001247083.2 | Solanum lycopersicum S-adenosyl-L-homocysteine hydrolase (SAHH), mRNA |
| NM_001247257.2 | Solanum lycopersicum mRNA for catalase 2 (CAT2 gene) |
| NM_001308944.1 | Solanum lycopersicum ribulose bisphosphate carboxylase small chain 2A, chloroplastic (LOC543974), mRNA |
| NM_001309210.1 | Solanum lycopersicum ribulose bisphosphate carboxylase small chain 3B, chloroplastic-like (LOC101268337), mRNA |
| XM_004235218.2 | PREDICTED: Solanum lycopersicum uncharacterized LOC101268660 (LOC101268660), mRNA |
| XM_004239679.2 | PREDICTED: Solanum lycopersicum probable small nuclear ribonucleoprotein G (LOC101245652), mRNA |
| NM_001247487.1 | Solanum lycopersicum beta-glucosidase 08 (LOC100191128), mRNA |
| XM_004239073.2 | PREDICTED: Solanum lycopersicum glutamate—glyoxylate aminotransferase 2 (LOC101265236), mRNA |
| XM_004236967.2 | PREDICTED: Solanum lycopersicum probable ADP-ribosylation factor GTPase-activating protein AGD11 (LOC101263994), mRNA |
| NM_001287365.1 | Solanum lycopersicum ubiquitin-conjugating enzyme E2 variant 1B-like (Suv), mRNA |
| NM_001247178.2 | Solanum lycopersicum 14-3-3 family protein (LOC543565), mRNA |
| XM_004251778.2 | PREDICTED: Solanum lycopersicum chlorophyll a–b binding protein 8, chloroplastic-like (LOC101265617), mRNA |
| NM_001308943.1 | Solanum lycopersicum ribulose bisphosphate carboxylase small chain 1, chloroplastic (LOC543973), mRNA |
| XM_004242475.2 | PREDICTED: Solanum lycopersicum probable pyridoxal biosynthesis protein PDX1 (LOC101257782), mRNA |
| XM_004247514.2 | PREDICTED: Solanum lycopersicum cysteine synthase (LOC101244415), mRNA |
| XM_004253046.2 | PREDICTED: Solanum lycopersicum eukaryotic initiation factor 4A-2-like (LOC101266405), mRNA |
| XM_004234267.2 | PREDICTED: Solanum lycopersicum 40S ribosomal protein SA-like (LOC101250574), mRNA |
| XM_004251632.2 | PREDICTED: Solanum lycopersicum ubiquitin-conjugating enzyme E2 2 (LOC101250809), mRNA |
| XM_004251632.2 | PREDICTED: Solanum lycopersicum WD repeat-containing protein 61-like (LOC101246693), mRNA |
| XM_004230521.2 | PREDICTED: Solanum lycopersicum nitronate monooxygenase (LOC101251627), mRNA |
| NM_001247570.2 | Solanum lycopersicum eukaryotic translation initiation factor 5A-1 (eIF-5A1), mRNA |
| NM_001246901.1 | Solanum lycopersicum CONSTANS interacting protein 4 (CIP4), mRNA |
| XM_004252320.2 | PREDICTED: Solanum lycopersicum 60S ribosomal protein L28-1 (LOC101250778), mRNA |
| XM_004237653.2 | PREDICTED: Solanum lycopersicum probable methyltransferase PMT24 (LOC101252680), mRNA |
| NM_001247128.2 | Solanum lycopersicum glycine-rich protein (LOC544061), transcript variant 1, mRNA |
NCBI, National Center for Biotechnology Information.