Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2016 Oct 6;6:34639. doi: 10.1038/srep34639

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2016, The Author(s)

This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/

PMC Copyright notice

(A) Maximum likelihood tree of Amd/Fmd protein sequence clusters (OTU0.9) showing three distinct clades (Clade 1, green; Clade II, blue; Clade III, red) with the root of the tree (bootstrap value, 0.996) being of bacterial origin. Clusters of archaeal sequences are highlighted (black branches). The Deep Lake haloarchaeal Amd/Fmd sequences (Hrr. lacusprofundi: Amd1, Amd2, Amd3; undescribed genus DL31: Halar_0730, Halar_1208, Halar_3390; Hht. litchfeldiae: halTADL_0419, halTADL_2650) were distributed in Clade I (Amd1, Halar_1208, Amd2, Halar_0731 and haltADL_0419), Clade II (Amd3 and Halar_3390) and Clade III (haltADL_2650). Scale bar represents 1 amino acid variation per aligned position. (B) Neighbour-joining tree of 16S rRNA gene sequences for closed genomes from Archaea and Bacteria which possess Amd/Fmd sequences. 16S rRNA gene sequences represented at class or phylum level. Clades are colored according to the proportion of closed genomes that contain Amd/Fmd sequences. The number of Amd/Fmd sequences relative to total number of closed genomes in a clade is shown in parentheses after the name of the clade. Bacterial clades with less than 10 sequences that do not contain Amd/Fmd sequences are not displayed. The scale bar represents 0.1 changes per base position.