Table 2. The selected optimal features for O-linked glycosylation.
| Num. | Feature | Position | Software |
|---|---|---|---|
| V1 | Conformational parameter of beta-turn | P8 | AAindex81 |
| V2 | PSSM | P38 | PSI-BLAST79 |
| V3 | B factor | P1 | PDB file53 |
| V4 | Normalized average hydrophobicity scales | P8 | AAindex81 |
| V5 | Standard deviation of side-chain depth index | P1 | PSAIA88 |
| V6 | PSSM | P293 | PSI-BLAST79 |
| V7 | PSSM | P248 | PSI-BLAST79 |
| V8 | PSSM | P8 | PSI-BLAST79 |
| V9 | PSSM | P128 | PSI-BLAST79 |
| V10 | Absolute accessibility of main chain | P1 | NACCESS84 |
| V11 | Mean polarity | P8 | AAindex81 |
Features highlighted in italic indicate structural features, while other features not highlighted are sequence-derived features or amino acid properties.