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. 2016 Oct 6;11(10):e0163488. doi: 10.1371/journal.pone.0163488

Table 1. Base case demographics, annual transition probabilities, and SVR probabilities per treatment scenario.

Demographics % Source
Sex distribution [22]
Men 0.64
Genotype distribution [28]
1–4 0.70
2–3 0.30
Annual transition probabilities
HIV-negative HIV-positive
Acute HCV to chronic HCV [25,29,41]
Women 0.58 0.64 a
Men 0.80 0.89 a
Fibrosis progression in METAVIR staging (yearly transition is a METAVIR transition) b
Women [30, 31]
<49 0.05 0.10
50 to 59 0.12 0.25
60 to 69 0.22 0.44
> = 70 0.30 0.60
Men [30, 31]
<49 0.03 0.06
50 to 59 0.07 0.13
60 to 69 0.11 0.23
70–79 0.15 0.31
> = 80 0.21 0.42
Disease progression after cirrhosis (F4)
To DC or HCC c
F4 to DC 0.039 0.059 [32,42]
DC to HCC 0.068 0.102 [33,42]
F4 to HCC 0.021 0.032 [30,42]
Death [30]
DC to death 0.31 d
HCC to death 0.43 d
Treatment scenarios–SVR probabilities
HIV-negative HIV-positive
Scenario 1: PegIFN/RBV
Genotype 1–4 (48 weeks) [34, 35]
F0-F2 0.47 0.28
F3-F4 0.33 0.20
Genotype 2–3 (24 weeks) [35, 36]
F0-F2 0.76 0.71
F3-F4 0.52 0.47
Scenario 2: DAA/RBV & Dual DAA
Dual DAA therapy [15, 37]
Genotype 1–4 (12 weeks)
F0-F4 0.95 0.95
DAA/RBV [3840]
Genotype 2–3 (22 weeks e,f)
F0-F4 0.90 0.90
Scenario 3&4: Dual DAA therapy [15, 37]
All genotypes (12 weeks)
F0-F4 0.95 0.95

Abbreviations: PegIFN: pegylated-interferon; RBV: Ribivarin; No: Number; SVR: sustained virological response; DAA: direct-acting antiviral

a Clearance rate reported to be 15 and 20% among HIV/HCV-coinfected individuals,; therefore we assumed an overall clearance rate of 17% among them. Clearance rate by sex among HIV/HCV-coinfected was proportional to that among HIV-negative individuals.

b 2 times the fibrosis progression rate of HIV-negative individuals

c 1.5 times the progression rate among HIV-negative individuals

d Not related to HIV status

e We calculated a weighted average for the number of treatment weeks for those with genotype 2–3 as those with genotype 2 should be treated for 12 weeks while those with genotype 3 should be treated for 24 weeks with SOF/RBV. We assumed that a maximum of 20% of PWID [28] in this genotype group are infected with genotype 2, therefore the weighted number of weeks of treatment is 21.6.

f At the time the model was built, data for 24 weeks treatment for genotype 3 was scarce and the Positron trial showed similar SVR among cirrhotic and non-cirrhotic patients with genotype 2. In post-hoc sensitivity analyses SVR probability for F3-F4 was set at 0.70.