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. 2016 Oct 6;22(11):259. doi: 10.1007/s00894-016-3119-5

Table 3.

Energy contributions to the specificity of the substrates due to systems A and B, in kcal mol−1

Residue System A System B
ΔH f(8OG)R ΔH f(GMP)R Specificity energya ΔH f(8OG)R ΔH f(GMP)R Specificity energyb
Asp119 −24328.99 −24262.90 −0.32 −19307.03 −19240.04 −0.27
Asp120 −24330.10 −24263.40 +0.29 −19298.65 −19231.54 −0.16
Asn33 −24365.65 −24300.19 −0.96 −19351.29 −19285.08 −1.05
Leu9 −24415.26 −24349.13 −0.28 −19392.44 −19325.05 +0.12
Lys23 −24492.09 −24426.03 −0.34 −19471.20 −19404.28 −0.35
Met81 −24434.66 −24369.51 −1.27 −19408.82 −19342.78 −1.23
Trp117 −24449.51 −24385.23 −2.12 −19436.33 −19371.44 −2.38
Phe27 −24457.49 −24392.04 −0.95 −19434.35 −19366.94 +0.14
Val83 −24425.62 −24359.08 +0.13 −19400.40 −19333.20 −0.06
Phe72 −24449.37 −24385.15 −2.19 −19424.21 −19360.74 −3.79
H2O-2134 −24366.34 −24301.07 −1.14 −19342.02 −19275.74 −0.99
Trp123 −24450.28 −24382.71 +1.16 −19424.93 −19357.47 +0.20
Phe139 −24448.58 −24383.16 −0.99 −19424.55 −19358.75 −1.47

a Energy = ΔH f(8OG)R − ΔH f(GMP)R − 66.41.

b Energy = ΔH f(8OG)R − ΔH f(GMP)R − 67.26.

A negative specificity implies that the residue binds to the 8-oxo-dGMP substrate more strongly than it binds to dGMP.

ΔH f(A-8OG) = −24446.41, ΔH f(A-GMP) = −24380.00, ΔH f(B-8OG) = −19421.98, and ΔH f(B-GMP) = −19354.72 kcal mol−1