Table 3.
Residue | System A | System B | ||||
---|---|---|---|---|---|---|
ΔH f(8OG)R | ΔH f(GMP)R | Specificity energya | ΔH f(8OG)R | ΔH f(GMP)R | Specificity energyb | |
Asp119 | −24328.99 | −24262.90 | −0.32 | −19307.03 | −19240.04 | −0.27 |
Asp120 | −24330.10 | −24263.40 | +0.29 | −19298.65 | −19231.54 | −0.16 |
Asn33 | −24365.65 | −24300.19 | −0.96 | −19351.29 | −19285.08 | −1.05 |
Leu9 | −24415.26 | −24349.13 | −0.28 | −19392.44 | −19325.05 | +0.12 |
Lys23 | −24492.09 | −24426.03 | −0.34 | −19471.20 | −19404.28 | −0.35 |
Met81 | −24434.66 | −24369.51 | −1.27 | −19408.82 | −19342.78 | −1.23 |
Trp117 | −24449.51 | −24385.23 | −2.12 | −19436.33 | −19371.44 | −2.38 |
Phe27 | −24457.49 | −24392.04 | −0.95 | −19434.35 | −19366.94 | +0.14 |
Val83 | −24425.62 | −24359.08 | +0.13 | −19400.40 | −19333.20 | −0.06 |
Phe72 | −24449.37 | −24385.15 | −2.19 | −19424.21 | −19360.74 | −3.79 |
H2O-2134 | −24366.34 | −24301.07 | −1.14 | −19342.02 | −19275.74 | −0.99 |
Trp123 | −24450.28 | −24382.71 | +1.16 | −19424.93 | −19357.47 | +0.20 |
Phe139 | −24448.58 | −24383.16 | −0.99 | −19424.55 | −19358.75 | −1.47 |
a Energy = ΔH f(8OG)R − ΔH f(GMP)R − 66.41.
b Energy = ΔH f(8OG)R − ΔH f(GMP)R − 67.26.
A negative specificity implies that the residue binds to the 8-oxo-dGMP substrate more strongly than it binds to dGMP.
ΔH f(A-8OG) = −24446.41, ΔH f(A-GMP) = −24380.00, ΔH f(B-8OG) = −19421.98, and ΔH f(B-GMP) = −19354.72 kcal mol−1