Table 2.
Predicted genes and their annotations in the 100 kb region of the japonica rice line
| Gene ID | Start (bp) | End (bp) | cDNA size (bp) | DNA strand | BLAST hit | Gene function |
|---|---|---|---|---|---|---|
| osj01 | 33 | 3,693 | 1,257 | + | ABA94923.1 | GTP-PI-KH-binding protein, putative |
| osj02 | 5,596 | 9,614 | 1,623 | + | ABA94924.1 | expressed protein |
| osj03 | 12,488 | 14,583 | 588 | + | ABA94926.1 | hypothetical protein LOC_Os11g41940 |
| osj04 | 17,626 | 18,180 | 555 | – | ABA94927.1 | hypothetical protein LOC_Os11g41950 |
| osj05 | 19,549 | 19,986 | 438 | + | ABA94928.1 | hypothetical protein LOC_Os11g41960 |
| osj06 | 21,998 | 22,448 | 204 | – | ABA94929.1 | expressed protein |
| osj07 | 23,438 | 26,842 | 2,301 | – | ABA94930.1 | hypothetical protein LOC_Os11g41980 |
| osj08 | 31,077 | 39,956 | 2,415 | – | ABA94931.1 | hypothetical protein LOC_Os11g41990 |
| osj09 | 45,208 | 49,523 | 699 | + | ABA94971.1 | Phyb1, putative |
| osj10 | 50,513 | 51,533 | 810 | – | ABA94972.1 | L-zip+NBS+LRR, putative |
| osj11 | 54,624 | 54,959 | 336 | – | ABA94973.1 | hypothetical protein LOC_Os11g42020 |
| osj12 | 63,371 | 65,551 | 2,181 | + | ABA94974.1 | expressed protein |
| osj13 | 76,976 | 79,783 | 2,808 | – | ABA94975.1 | NB-ARC domain, putative |
| osj14 | 83,579 | 84,077 | 339 | – | ABA94976.1 | hypothetical protein LOC_Os11g42050 |
| osj15 | 103,360 | 105,306 | 1,947 | – | ABA94977.1 | Leucine-rich repeat, putative |