Table 4.
Microsynteny analysis of the predicted genes in the 100 kb region of the japonica rice line
| Gene ID | BLAST hit | Bit score | E-value | Homology | Start (bp) | End (bp) |
|---|---|---|---|---|---|---|
| osj01 | Chr11_pmol osa1 | 531 | E-150 | 278/279 (99%) | 24,671,510 | 24,671,788 |
| osj02 | Chr11_pmol osa1 | 1,269 | 0.0 | 660/660 (100%) | 24,674,714 | 24,675,373 |
| osj03 | Chr11_pmol osa1 | 608 | E-173 | 316/316 (100%) | 24,682,968 | 24,683,283 |
| osj04 | Chr11_pmol osa1 | 1,067 | 0.0 | 555/555 (100%) | 24,686,880 | 24,686,326 |
| osj05 | Chr11_pmol osa1 | 842 | 0.0 | 438/438 (100%) | 24,688,249 | 24,688,686 |
| osj06 | Chr11_pmol osa1 | 367 | E-102 | 191/191 (100%) | 24,691,148 | 24,690,958 |
| osj07 | Chr11_pmol osa1 | 4,109 | 0.0 | 2,137/2,137 (100%) | 24,695,542 | 24,693,406 |
| osj08 | Chr11_pmol osa1 | 1,396 | 0.0 | 726/726 (100%) | 24,705,726 | 24,705,001 |
| osj09 | Chr11_pmol osa1 | 217 | 5E-56 | 113/113 (100%) | 24,717,676 | 24,717,788 |
| osj10 | Chr11_pmol osa1 | 1,148 | 0.0 | 597/597 (100%) | 24,719,809 | 24,719,213 |
| osj11 | Chr11_pmol osa1 | 646 | 0.0 | 336/336 (100%) | 24,723,659 | 24,723,324 |
| osj12 | Chr11_pmol osa1 | 4,194 | 0.0 | 2,181/2,181 (100%) | 24,732,071 | 24,734,251 |
| osj13 | Chr11_pmol osa1 | 5,399 | 0.0 | 2,808/2,808 (100%) | 24,748,483 | 24,745,676 |
| osj14 | Chr11_pmol osa1 | 381 | E-105 | 198/198 (100%) | 24,752,777 | 24,752,580 |
| osj15 | Chr11_pmol osa1 | 3,744 | 0.0 | 1,947/1,947 (100%) | 24,774,006 | 24,772,060 |