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. 2016 Oct 6;14:258. doi: 10.1186/s12957-016-0997-z

Table 4.

The identified transcription factors (TFs) and tumor associated genes (TAGs) among the differentially expressed genes (DEGs). Tumor suppressed genes, TSGs

DEGs TF numbers TFs TAG numbers TAGs
TSGs Oncogenes Others
Up-regulated 1 KLF12 33 BAP1, THBS1, DKK1, PAF1, ST13, LRP1B, PDGFRL, ITGB1, TPM1, GJA1, CDH11, SLIT2, GLIPR1, FAT1, SOD2, FOXO3, EFNA1, GAS1, PTPRF, RAD51C, CAV2, SDHA SET, CCNA2, AXL, NRAS, ROS1, SCK GTF2F2, CTGF, FHL2, C1QBP, CCL2
Down-regulated 8 ASCL1, ETV4, HSF1, LMO3, PML, RUNX3, TCF7, USF2 21 HIPK2, YAP1, ERRFI1, PTPRK, KANK1, BNIP3L, DUSP22, SASH1, CDKN1A, NDRG4, ZFHX3, NDRG1, TGFBR2, BCL2L2, NCOA3, CCND1, CDC25B PTHLH, EMP1, CAV1, GLS