Table 1.
Crystal | Zn2+-NNQQNY | Cd2+-NNQQNY | GNNQQNY-P21 | GNNQQNY-P212121 |
Data collection | ||||
Radiation source | Electron FEG | Electron FEG | Electron FEG | Electron FEG |
Dose upper limit, e−/ Å2 | 5 | 5 | 5 | 5 |
Space group | P21 | P21 | P21 | P212121 |
Cell dimensions | ||||
a,b,c, Å | 21.5, 4.9, 23.9 | 22.1, 4.9, 23.5 | 22.9, 4.9, 24.2 | 23.2, 4.9, 40.5 |
α,β,γ, ° | 90, 104.0, 90 | 90, 104.3, 90 | 90, 107.8, 90 | 90, 90, 90 |
Resolution limit, Å | 1.00 (1.06–1.00) | 1.00 (1.05–1.00) | 1.10 (1.16–1.10) | 1.05 (1.11–1.05) |
Wavelength, Å | 0.0251 | 0.0251 | 0.0251 | 0.0251 |
No. of crystals merged | 6 | 4 | 4 | 1 |
Rmerge | 0.151 (0.245) | 0.180 (0.282) | 0.265 (0.450) | 0.199 (0.586) |
Rr.i.m. | 0.163 (0.280) | 0.203 (0.363) | 0.286 (0.482) | 0.230 (0.669) |
Rp.i.m. | 0.057 (0.111) | 0.087 (0.181) | 0.139 (0.223) | 0.109 (0.305) |
I/σI | 10.2 (6.6) | 7.3 (3.7) | 4.6 (3.0) | 4.2 (1.8) |
CC1/2, % | 98.5 (90.6) | 96.6 (53.9) | 98.4 (88.4) | 98.5 (69.3) |
Completeness, % | 82.6 (55.3) | 84.5 (66.0) | 94.8 (96.0) | 78.6 (79.3) |
Multiplicity | 7.1 (5.1) | 4.6 (3.3) | 6.6 (7.2) | 3.7 (3.7) |
Unique reflections | 2,360 (202) | 2,542 (257) | 2,219 (326) | 1,837 (257) |
Refinement | ||||
Resolution range, Å | 22–1.0 | 22–1.0 | 23–1.1 | 20–1.05 |
No. of reflections (work) | 2,124 | 2,308 | 1,997 | 1,653 |
Rwork | 0.156 | 0.220 | 0.187 | 0.177 |
Rfree | 0.194 | 0.242 | 0.224 | 0.186 |
CCwork | 0.955 | 0.922 | 0.954 | 0.966 |
CCfree | 0.912 | 0.934 | 0.947 | 0.979 |
No. of atoms (incl. hydrogen) | 111 | 113 | 114 | 113 |
Protein | 97 | 98 | 107 | 107 |
Water | 6 | 7 | 7 | 6 |
Cation | 1 | 1 | 0 | 0 |
Acetate | 7 | 7 | 0 | 0 |
B factors, Å2 | ||||
Protein | 4.0 | 4.9 | 4.5 | 4.2 |
Water | 12.9 | 16.0 | 14.5 | 14.7 |
Cation | 3.7 | 11.3 | n/a | n/a |
Acetate | 4.1 | 17.2 | n/a | n/a |
Wilson B, Å2 | 3.2 | 3.4 | 6.1 | 5.7 |
Rms deviations | ||||
Bond lengths, Å | 0.020 | 0.021 | 0.019 | 0.017 |
Bond angles, ° | 1.5 | 1.7 | 1.3 | 1.6 |
Numbers reported in parentheses correspond to values in the highest-resolution shell. incl., including; n/a, not applicable.