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. 2016 Oct 10;6:34992. doi: 10.1038/srep34992

Table 1. Alignment of the analogous imidacloprid binding residues in four imidacloprid metabolizing enzymes: CYP6ER1, CYP6CM1, CYP3A4, CYP6G1.

CYP6ER1 CYP6CM1 CYP3A4 CYP6G1 SRS location Secondary structure
124Phe 130Phe 98Ser 124Phe SRS-1 Loop between helices B and C
288Asp 224PHe 190Leu 218Phe SRS-2 Loop between helices F and F’
289Pro 225Arg 191Arg 219Thr SRS-2 Loop between helices F and F’
290Asp 226Phe 192Phe 220Phe SRS-2 Loop between helices F and F’
246Phe 251Ala 219Val 245Phe SRS-3 Loop between helices G’ and G
247Thr 252Val 220Phe 246Phe SRS-3 Loop between helices G’ and G
312Leu 321Ser 283Phe 311Thr SRS-4 Helix I (O2 binding motif)
313Ala 322Ala 284Ala 312Ala SRS-4 Helix I (O2 binding motif)
314Gly 323Gly 285Gly 313Gly SRS-4 Helix I (O2 binding motif)
317Thr 326Pro 288Thr 316Thr SRS-4 Helix I (O2 binding motif)
374Gly 387Ala 348ILe 377Val SRS-5 Loop between helix K and b-strand
375Pro 388Ser 349Ala 378Leu SRS-5 Loop between helix K and b-strand
376Val 389Gly 350Met 379Pro SRS-5 Loop between helix K and b-strand
487Thr 501Ser 460Gly 497Gly SRS-6 C-terminal loop
488Phe 502Phe 461Gly 498Phe SRS-6 C-terminal loop
489Val 503Thr 462Leu 499Val SRS-6 C-terminal loop

Analyses were based on structure sequence alignment between the CYP6CM1 model and the CYP3A4 crystallographic structure together with sequence alignment to CYP6G1. Some of the residues that contribute to the stabilization of imidacloprid in the active site are also important in the stabilization of the heme and oxygen molecules.