Figure 3. Differential coexpression in metabolic pathways.
(A) The distribution of difference in correlation of 58,158 intra-pathway gene pairs (red) and 58,158 random gene pairs (green). (B) The categories of dysregulated pathways with significantly changed correlations between control and infection groups. (C) Photosynthesis light reactions pathway (PWY-101). The mean correlation of gene pairs in photosynthesis light reactions was 0.36 in the control group and increased to 0.67 after pathogen infection. Average log2-fold change values of the 35 metabolic genes are presented in the bar plot on the left. The 30 DEGs detected using the R package maSigPro are indicated in bold.