| Sequencing reads |
| Total number of reads |
210,018,551 |
| Total number of nucleotides (Gbp) |
11.7 |
| Total number of nucleotides used (Gbp) |
11.5 |
| Total number of nucleotides unused (Gbp) |
0.2 |
|
De novo transcriptome assembly |
| Number of putative transcripts |
96,560 |
| Number of components (generally correspond with genes) |
48,615 |
| Number of components with splice variants |
11,215 |
| N50 |
1,863 |
| Total number of nucleotides in the assembly (bp) |
113,238,654 |
| Peptides |
| Number of peptides (alternative splice variants included) |
60,880 |
| Number of peptides (alternative splice variants excluded) |
23,691 |
| Annotation of peptides (alternative splice variants excluded) |
| Swiss-Prot |
16,711 |
| Pfam-A |
17,087 |
| Signal peptide |
2,240 |
| Transmembrane helices |
5,847 |
| eggNOG (evolutionary genealogy of genes) |
13,524 |
| Gene Ontology |
15,647 |
| Expression |
| Number of transcripts expressed in at least one tissue |
56,735 |
| Number of components expressed in at least one tissue |
28,738 |
