Table 2. Summary of alignment statistics (minimum, maximum, mean and s.d.) of ChIP- and MeDIP-seq samples aligned with Bowtie2.

Statistic	ChIP-seq				MeDIP-seq
	Min	Max	Average	Stdev	Min	Max	Average	Stdev
The table contains the number of mapped reads, number and percentage of high quality uniquely and multi-mapped reads and number and percentage of uniquely mapped reads.
Mapped Reads (in millions)	14.6	51.0	33.0	6.48	23.9	64.9	33.6	6.40
High-quality reads (in millions)	13.6	47.8	32.1	6.27	21.1	58.1	30.1	5.59
High-quality reads [%]	87.00	100.00	97.32	2.72	82.76	98.36	89.80	4.09
Uniquely mapped reads (in millions)	9.65	41.2	27.9	5.65	15.1	42.6	22.0	4.62
Uniquely mapped reads [%]	60.00	95.00	84.55	8.39	49.92	87.00	65.94	9.70