Table 3. List of specific primers used for quantitative real-time PCR.
Gene | Accession | Primer (5′–3′) | Size (bp) | E (%) | Ta | Reference | |
---|---|---|---|---|---|---|---|
dnmt3a1 | AB196917 | F | GCTAAGTTTGGTAAAGTGCGG | 103 | 96 | 58 °C | 28 |
R | GGATGTCCTCCTTATCATTCA | ||||||
dnmt3a2 | AB196919 | F | TAGGAAAGGCTTGTTTGAGGG | 157 | 105 | 59 °C | 28 |
R | GCGTGAGATGTCTTTCTTGTC | ||||||
dnmt3b1 | AB196915 | F | GTGCCTCTGGGATGGATAAA | 174 | 98 | 60 °C | Newly designed |
R | GCTCTGTGCACCACAGGATA | ||||||
dnmt3b2 | AB196918 | F | CGCTACATTGCCTCTGAGA | 113 | 95 | 58 °C | 28 |
R | GCCAGATGTTTCCTAGTGATG | ||||||
dnmt3b3 | AB196914 | F | GCTCAGGTGCTGCTTTTTGTC | 152 | 95 | 61 °C | 28 |
R | TTTTTGAATCTGTGCTTTGCTG | ||||||
dnmt3b4 | AB196916 | F | TCATTGACTTGGGGGAAGAG | 172 | 97 | 60 °C | Newly designed |
R | TAATCATCATGGCTGCTGCT | ||||||
mt2 | BC152694 | F | AAGCTCTTTGTGGATACTCTCTGG | 112 | 94 | 60.8 °C | Newly designed |
R | GCAGGTAGTACACTGGCAATTAGTG | ||||||
hsp70 | AB062116 | F | CATCGACGCCAACGGG | 191 | 95 | 60 °C | 61 |
R | CCAGGGAGTTTTTAGCAGAAATCTT | ||||||
hsp90 | BC075757 | F | GGTACCAAAGTCATTCTCCACCTT | 154 | 97 | 61.8 °C | Newly designed |
R | CCTCAAGATCCACCTCTTTTTCTC | ||||||
actb | BC165823 | F | CCAACACTGTATTGTCTGGTGGTA | 203 | 101 | 61 °C | Newly designed |
R | GTACTCCTGCTTGCTAATCCACAT | ||||||
ef1a | AY422992 | F | GGTACTACTCTTCTTGATGCCCTTG | 200 | 98 | 60.8 °C | Newly designed |
R | GACTTGACCTCAGTGGTTACATTG |
For each gene, its GenBank accession number, amplicon size (bp), amplification efficiency (E) and annealing temperature (Ta) are indicated.