Table 2.
OTUs in relation to the phyla and the number of sequences they contain. The OTUs were computed using mothur software pipeline [26].
OTUs | Number of sequences | Accession numbers of sequences | Genus | Phylum |
---|---|---|---|---|
OTU 1 | 1 | KR185703_10_5A4 | Ochrobactrum | Proteobacteria |
OTU 2 | 1 | KR185716_10_5A8 | Rhodococcus | Actinobacteria |
OTU 3 | 2 | KR185719_10_6A1, KR185718_10_3A2 | Acinetobacter | Proteobacteria |
OTU 4 | 1 | KU216390_10_7A4 | Pseudoxanthomonas | Proteobacteria |
OTU 5 | 1 | KM578849_10_1E | Rhodococcus | Actinobacteria |
OTU 6 | 2 | KM578846_10_1C, KR185712_10_8A5 | Pseudomonas | Proteobacteria |
OTU 7 | 1 | KU216391_10_9A4 | Flavobacterium | Bacteriodetes |
OTU 8 | 2 | KR185715_10_1B2, KR185714_10_1B1 | Rhodococcus | Actinobacteria |
OTU 9 | 2 | KR185731_10_1B3, KR185732_10_7A3 | Microbacterium | Actinobacteria |
OTU 10 | 2 | KR185730_10_11A, KR185729_10_9A3 | Bacillus | Firmicutes |
OTU 11 | 17 | KR185710_10_8A4, KR185713_10_11C, KR185697_10_3A3, KR185709_10_8A3, KR185696_10_3A1, KR185701_10_4A4, KR185693_10_1A8, KR185695_10_2A3, KR185706_10_6A2, KR185699_10_4A2, KR185704_10_5A5, KM578847_10_1B, KR185700_10_4A3, KR185707_10_7A6, KR185702_10_5A3, KR185705_10_5A7, KR185698_10_4A1 | Pseudomonas | Proteobacteria |
OTU 12 | 2 | KU216393_10_11F, KU216392_10_9A6 | Stenotrophomonas | Proteobacteria |
OTU 13 | 5 | KM578848_10_1D, KR185727_10_11G, KR185726_10_11E, KR185725_10_11D, KR185723_10_7A2 | Arthrobacter | Actinobacteria |
OTU 14 | 1 | KU216394_10_11H | Pseudomonas | Proteobacteria |
OTU 15 | 1 | KR185728_10_11J | Arthrobacter | Actinobacteria |
OTU 16 | 3 | KR185720_10_9A5, KR185722_10_11M, KR185721_10_11K | Acinetobacter | Proteobacteria |