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. 2016 Oct 13;6:35386. doi: 10.1038/srep35386

Table 1. 3, 4-DHSA dioxygenases used for constructing the phylogenetic tree shown in Fig. S4.

Microorganism Group Sequence identity (%) Accession
Comamonas testosteroni TA441 β-proteobacteria 100.0% Q9FAE3
Pseudomonas putida DOC21 γ-proteobacteria 62.2% H9ZGL6
Shewanella pealeana ATCC 700345 γ-proteobacteria 61.7% A8H4I6
Pseudoalteromonas haloplanktis TAC 125 γ-proteobacteria 59.7% Q3IE83
Burkholderia cenocepacia J2315 β-proteobacteria 59.1% B4EKN7
Ralstonia eutropha (Cupriavidus necator) H16 β-proteobacteria 58.8% F8GRC0
Cupriavidus taiwanensis LMG 19424 β-proteobacteria 58.4% B2AIU1
Rhodococcus jostii RHA1 actinobacteria 44.5% Q9KWQ5
Gordonia polyisoprenivorans DSM 44266 actinobacteria 44.1% H6MSZ4
Amycolicicoccus subflavus DSM 45089 actinobacteria 44.1% F6EN61
Amycolatopsis decaplanina DSM 44594 actinobacteria 44.0% M2WZF0
Amycolatopsis mediterranei U-32 actinobacteria 43.8% D8HWH1
Kutzneria sp. 744 actinobacteria 43.3% W7SSZ6
Rhodococcus pyridinivorans AK37 actinobacteria 43.1% H0JLI7
Gordonia terrae C-6 actinobacteria 42.5% R7YBG9
Dietzia cinnamea P4 actinobacteria 42.2% E6J6R1
Mycobacterium tuberculosis ATCC 25618 actinobacteria 42.1% I6YCG0
Nocardia seriolae actinobacteria 41.3% A0A0B8MZT4
Pseudomonas pseudoalcaligenes* γ-proteobacteria 39.7% P08695

The sequences were retrieved from the UniProtKB/TrEMBL database by performing standard BLASTP search with 3, 4-DHSA dioxygenase (the product of tesB) from C. testosteroni TA441 as a query. In known steroid-degrading proteobacteria, the dioxygenase gene is harbored in the conserved testosterone-degradation gene cluster25.

*The biphenyl-2, 3-diol 1, 2-dixoxygenase of P. pseudoalcaligenes.