Table 1.
Genetic diversity based on Arlequin Ver 3.11 software and demographical parameters based on coalescent analysis performed with Lamarc 2.1.9 software for 17 populations of Tabebuia serratifolia
| cpDNA | ITS | Combined cpDNA and ITS nrDNA | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Pop | N | k | h | π | SD | k | h | π | SD | θ | θ - 95 % CI | Ne | Ne - 95 % CI |
| North - Northeast | |||||||||||||
| CCM | 20 | 2 | 0.100 | 0.0001 | 0.0001 | 1 | 0.000 | 0.0000 | 0.0000 | 0.0001 | 0.0001 – 0.0004 | 270.34 | 270.34 – 1081.37 |
| CRA | 09 | 9 | 1.000 | 0.0065 | 0.0037 | 2 | 0.389 | 0.0075 | 0.0047 | 0.0071 | 0.0023 – 0.0231 | 19194.38 | 6217.90 – 62449.31 |
| POF | 27 | 8 | 0.752 | 0.0012 | 0.0008 | 3 | 0.145 | 0.0003 | 0.0005 | 0.0009 | 0.0005 – 0.0024 | 2433.09 | 1351.72 – 6488.24 |
| SEC | 04 | 2 | 0.500 | 0.0009 | 0.0008 | 3 | 0.833 | 0.0035 | 0.0030 | – | – | – | – |
| Central – Central West | |||||||||||||
| ALT | 32 | 16 | 0.845 | 0.0022 | 0.0012 | 2 | 0.405 | 0.0008 | 0.0008 | 0.0071 | 0.0001 – 0.0229 | 19194.38 | 270.34 – 61908.62 |
| ARA | 13 | 4 | 0.423 | 0.0008 | 0.0006 | 2 | 0.385 | 0.0007 | 0.0008 | 0.0006 | 0.0001 – 0.0019 | 1622.06 | 270.34 – 5136.52 |
| BOD | 10 | 4 | 0.533 | 0.0005 | 0.0004 | 1 | 0.000 | 0.0000 | 0.0000 | 0.0003 | 0.0001 – 0.0011 | 811.03 | 270.343 – 2973.78 |
| GSV | 03 | 1 | 0.000 | 0.0000 | 0.0000 | 2 | 1.000 | 0.0039 | 0.0036 | – | – | – | – |
| LUZ | 30 | 4 | 0.356 | 0.0008 | 0.0006 | 2 | 0.131 | 0.0003 | 0.0004 | 0.0006 | 0.0002 – 0.0013 | 1622.06 | 540.69 – 3514.46 |
| MIM | 13 | 7 | 0.846 | 0.0031 | 0.0018 | 5 | 0.756 | 0.0090 | 0.0004 | 0.0024 | 0.0009 – 0.0068 | 6488.24 | 2433.09 – 18383.35 |
| POT | 02 | 2 | 1.000 | 0.0040 | 0.0043 | 1 | 0.000 | 0.0000 | 0.0000 | – | – | – | – |
| PNA | 04 | 2 | 0.500 | 0.0003 | 0.0004 | 1 | 0.000 | 0.0000 | 0.0000 | – | – | – | – |
| Southeast | |||||||||||||
| CAP | 23 | 8 | 0.629 | 0.0010 | 0.0006 | 1 | 0.000 | 0.0000 | 0.0000 | 0.0008 | 0.0005 – 0.0014 | 2162.75 | 1351.72 – 3784.81 |
| PNI | 21 | 11 | 0.871 | 0.0032 | 0.0018 | 6 | 0.758 | 0.0080 | 0.0048 | 0.0038 | 0.0014 – 0.0124 | 10273.05 | 3784.81 – 33522.57 |
| SAB | 06 | 4 | 0.866 | 0.0047 | 0.0029 | 2 | 0.533 | 0.0010 | 0.0011 | 0.0012 | 0.0004 – 0.0117 | 3244.12 | 1081.37 – 31630.17 |
| SCA | 21 | 7 | 0.500 | 0.0009 | 0.0006 | 2 | 0.095 | 0.0007 | 0.0008 | 0.0009 | 0.0004 – 0.0016 | 2433.09 | 1081.37 – 4325.49 |
| SUM | 19 | 3 | 0.205 | 0.0009 | 0.0006 | 3 | 0.298 | 0.0022 | 0.0017 | 0.0005 | 0.0002 – 0.0955 | 1351.72 | 540.69 – 258177.90 |
| Mean | – | 5.53 | 0.584 | – | – | 2.29 | 0.337 | – | – | – | – | – | – |
| SD | – | 3.99 | 0.306 | – | – | 1.40 | 0.335 | – | – | – | – | – | – |
| Overall | 257 | 79 | 0.873 | 0.0032 | 0.0017 | 21 | 0.772 | 0.0058 | 0.0034 | 0.0275 | 0.0221–0.0355 | 74344.42 | 59745.88 – 95971.88 |
N sample size, k - number of haplotypes, h haplotype diversity, π nucleotide diversity, SD standard deviation, θ coalescent or mutation parameter, Ne effective population size; 95 % CI is the credibility interval at 95 %. Θ and Ne were estimated for combined cpDNA and ITS data