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. Author manuscript; available in PMC: 2017 Aug 1.
Published in final edited form as: Ann N Y Acad Sci. 2016 Jul 2;1378(1):41–49. doi: 10.1111/nyas.13128

Table 2.

Comparison of ligand-associated spectral shifts of acrylodan covalently attached at one of five positions in mAChE with ligand-associated variability of B factors observed from X-ray structures.

Ligand Leu 76 (Gln 74)
Ω Loop gorge rim
Glu 81 (Ser 79)
Ω Loop top outside
Glu 84 (Glu 82)
Ω Loop top outside
Tyr 124 (Tyr 121)
Gorge “choke point”
His 287 (Asn 280)
Acyl pocket loop, PAS
Spectral
shift
(nm)
Δ B value
(complex-apo)
Spectral
shift
(nm)
Δ B value
(complex-apo)
Spectral
shift
(nm)
Δ B value
(complex-apo)
Spectr
al shift
(nm)
Δ B value
(complex-apo)
Spectral
shift
(nm)
Δ B value
(complex-apo)
mAChE m,hAChE TcAChE mAChE m,hAChE TcAChE mAChE m,hAChE TcAChE mAChE m,hAChE TcAChE mAChE m,hAChE TcAChE
Tacrine 4 −8 21 −6 33 −1 −3 0 0 1
Edrophonium 4 2 21 −3 33 −1 0 1 0 2
Huperzine A 6 −20 0 21 −13 2 33 −11 2 0 −10 1 0 −13 0
BW284c51 3 7 21 7 35 9 −13 11 −14 15
Decamethonium 3 −10 −10 21 −20 −12 28 −10 −2 −35 3 3 −7 −25 −4
Gallamine −4 11 14 9 9 2 −25 −5 −14 −1
Fas2 0 −14 −14 21 6 2 35 6 −3 −23 6 −12 −17 −3 −4
TFK+ 6 8 1 21 12 −16 35 10 −2 3 16 −1 0 21 −3
Rivastigmine 0 10 −30 11 20 7 −4 10 0 9
Sarin 3 −13 11 −9 23 −6 0 2 0 −5
VX −5 −1 4 1 19 0 −11 6 0 5
DFP −5 −9 −14 −6 18 −6 −10 −6 −3 21

Note: Comparison of ligand-associated spectral shifts of acrylodan12,13 covalently attached at one of five positions in mAChE (76, 81, 84,124, and 287; TcAChE numbering is shown in parentheses) with ligand-associated variability of B factors (Δ B value = (B value: Cαposition)complex − (B value: Cαposition)apo) observed from X-ray structures. B value differences observed for mouse AChE (mAChE) and human AChE (hAChE) X-ray structures were similar (for complexes with the same ligand) and are shown in the same column (as m,hAChE), while data for Torpedo californica AChE (TcAChE) structures are shown in a separate column. A list of the structures used in the analysis is given in Table S1.