Table 2.
Ligand | Leu 76 (Gln 74) Ω Loop gorge rim |
Glu 81 (Ser 79) Ω Loop top outside |
Glu 84 (Glu 82) Ω Loop top outside |
Tyr 124 (Tyr 121) Gorge “choke point” |
His 287 (Asn 280) Acyl pocket loop, PAS |
||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Spectral shift (nm) |
Δ B value (complex-apo) |
Spectral shift (nm) |
Δ B value (complex-apo) |
Spectral shift (nm) |
Δ B value (complex-apo) |
Spectr al shift (nm) |
Δ B value (complex-apo) |
Spectral shift (nm) |
Δ B value (complex-apo) |
||||||
mAChE | m,hAChE | TcAChE | mAChE | m,hAChE | TcAChE | mAChE | m,hAChE | TcAChE | mAChE | m,hAChE | TcAChE | mAChE | m,hAChE | TcAChE | |
Tacrine | 4 | — | −8 | 21 | — | −6 | 33 | — | −1 | −3 | — | 0 | 0 | — | 1 |
Edrophonium | 4 | — | 2 | 21 | — | −3 | 33 | — | −1 | 0 | — | 1 | 0 | — | 2 |
Huperzine A | 6 | −20 | 0 | 21 | −13 | 2 | 33 | −11 | 2 | 0 | −10 | 1 | 0 | −13 | 0 |
BW284c51 | 3 | 7 | 21 | 7 | 35 | 9 | −13 | 11 | −14 | 15 | |||||
Decamethonium | 3 | −10 | −10 | 21 | −20 | −12 | 28 | −10 | −2 | −35 | 3 | 3 | −7 | −25 | −4 |
Gallamine | −4 | 11 | 14 | 9 | 9 | 2 | −25 | −5 | −14 | −1 | |||||
Fas2 | 0 | −14 | −14 | 21 | 6 | 2 | 35 | 6 | −3 | −23 | 6 | −12 | −17 | −3 | −4 |
TFK+ | 6 | 8 | 1 | 21 | 12 | −16 | 35 | 10 | −2 | 3 | 16 | −1 | 0 | 21 | −3 |
Rivastigmine | 0 | 10 | −30 | 11 | 20 | 7 | −4 | 10 | 0 | 9 | |||||
Sarin | 3 | −13 | — | 11 | −9 | — | 23 | −6 | — | 0 | 2 | — | 0 | −5 | — |
VX | −5 | −1 | — | 4 | 1 | — | 19 | 0 | — | −11 | 6 | — | 0 | 5 | — |
DFP | −5 | −9 | — | −14 | −6 | — | 18 | −6 | — | −10 | −6 | — | −3 | 21 | — |
Note: Comparison of ligand-associated spectral shifts of acrylodan12,13 covalently attached at one of five positions in mAChE (76, 81, 84,124, and 287; TcAChE numbering is shown in parentheses) with ligand-associated variability of B factors (Δ B value = (B value: Cαposition)complex − (B value: Cαposition)apo) observed from X-ray structures. B value differences observed for mouse AChE (mAChE) and human AChE (hAChE) X-ray structures were similar (for complexes with the same ligand) and are shown in the same column (as m,hAChE), while data for Torpedo californica AChE (TcAChE) structures are shown in a separate column. A list of the structures used in the analysis is given in Table S1.