Table 1.
Classification and general features of Rhodobacteraceae strain O3.65 according to the MIGS recommendations [92]
MIGS ID | Property | Term | Evidence codea |
---|---|---|---|
Classification | Domain Bacteria | TAS [93] | |
Phylum Proteobacteria | TAS [94] | ||
Class Alphaproteobacteria | TAS [95, 96] | ||
Order Rhodobacterales | TAS [95] | ||
Family Rhodobacteraceae | TAS [7, 95, 97] | ||
Genus not specified | |||
Species not specified | |||
(Type) strain: O3.65 (LPUY00000000.1) | |||
Gram stain | negative | IDA | |
Cell shape | rod shaped | IDA | |
Motility | motile | IDA | |
Sporulation | none | NAS | |
Temperature range | mesophile | IDA | |
Optimum temperature | 30 °C | IDA | |
pH range; Optimum | not specified | ||
Carbon source | oligo-, di-saccharides, organic acids, amino acids, hydroxylated aromatic hydrocarbons | IDA | |
Energy metabolism | heterotrophic | IDA | |
MIGS-6 | Habitat | marine | IDA |
MIGS 6.3 | Salinity | 1- < 8 %, optimum 3.5 % | IDA |
MIGS-22 | Oxygen requirement | aerobic | IDA |
MIGS-15 | Biotic relationship | unknown | NAS |
MIGS-14 | Pathogenicity | none | NAS |
Biosafety level | 1 | TAS [98] | |
MIGS-4 | Geographic location | Gulf of Mexico | IDA |
MIGS-5 | Sample collection | June 1, 2010 | IDA |
MIGS-4.1 | Latitude | 28°43.967 N | IDA |
MIGS-4.2 | Longitude | 88°22.993 W | IDA |
MIGS-4.4 | Altitude | not specified |
aEvidence codes - IDA inferred from direct assay, TAS traceable author statement (i.e., a direct report exists in the literature), NAS non-traceable author statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [99]