Table 3. Top down-regulated and up-regulated differentially expressed genes identified in HPAM (3a) and HPBM (3b) when compared to HNM group.
| TAGI seq. ID | Fold change (RPKM) | FDR p-value correction | Sequence Description |
|---|---|---|---|
| 3a. HNM vs HPAM Differentially expressed genes in HPAM group when compared to HNM group. | |||
| TC423373 | -1310.78 | 1.25E-43 | puroindoline-a |
| CD915505 | 902.62 | 9.63E-19 | low-molecular-weight glutenin subunit |
| NP9350187 | 166.51 | 5.41E-07 | low molecular weight glutenin |
| CJ520220 | -843.82 | 6.98E-07 | ---NA--- |
| BE413821 | 117.62 | 1.07E-06 | alpha- partial |
| TC393944 | -526.26 | 1.14E-06 | alpha- partial |
| TC458604 | -193.09 | 2.45E-06 | ---NA--- |
| TC393980 | 40.28 | 2.46E-06 | low-molecular-weight glutenin subunit |
| TC391918 | 28.3 | 6.57E-06 | formate dehydrogenase mitochondrial-like |
| TC412255 | -152.77 | 9.59E-06 | ---NA--- |
| 3b. HNM vs HPBM Differentially expressed genes in HPBM group when compared to HNM group. | |||
| CK194194 | -78.27 | 3.13E-17 | fructose-bisphosphate aldolase |
| CA602991 | 85.03 | 6.94E-08 | inactive poly |
| TC450096 | -66.92 | 8.68E-07 | ---NA--- |
| TC375635 | 11.6 | 1.91E-06 | dihydrolipoamide s-acetyltransferase |
| CK162779 | -233.06 | 2.66E-06 | lrr receptor-like serine threonine-protein kinase fls2 |
| CD897082 | -62.56 | 4.13E-06 | ---NA--- |
| TC457676 | -180.99 | 4.15E-06 | ---NA--- |
| TC420456 | 6.94 | 6.2E-06 | ac078948_18 serine protease |
TAGI sequence ID = Triticum Aestivum Gene Indices sequence ID; RPKM = reads per kilobase per million; NA = not available; FDR = false discovery rate; HNM = hard non-mutant; HPAM = hard Pina-mutant; HPBM = hard Pinb-mutant.