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. Author manuscript; available in PMC: 2017 Nov 1.
Published in final edited form as: J Microbiol Methods. 2016 Sep 5;130:95–99. doi: 10.1016/j.mimet.2016.09.002

Table 1.

Dominant genera identified using MiSeq (16S_V4) and PacBio RSII (full 16S) sequencing data.

MiSeq (16S_V4) PacBio RSII (full 16S)
S1e Pseudomonas (64%) Pseudomonas (84%)
S2d Prevotella (42%) Streptococcus (36%)
S4e Staphylococcus (11%) Staphylococcus (43%)
S5e Enterobacteriaceae unclassified genus (16%) Burkholderia (63%)
S6e Enterobacteriaceae unclassified genus (76%) Escherichia or Shigella (97%)
S9d Prevotella (38%) Haemophilus (83%)
S11e Pseudomonas (30%) Pseudomonas (70%)
S11f Pseudomonas (41%) Pseudomonas (69%)
S11g Pseudomonas (39%) Pseudomonas (43%)
S12e Enterobacteriaceae unclassified genus (87%) Escherichia or Shigella (99%)
S12f Enterobacteriaceae unclassified genus (98%) Escherichia or Shigella (99%)
S12g Enterobacteriaceae unclassified genus (99%) Escherichia or Shigella (99%)