Table 4. Loci and alleles significantly associated with the three non-correlated climatic variables in E. grandis.
Locus-allele (bp) | Scaffold† | MAT | Isothermality | MAP | Putative function at E ≤ 10−5 (Organism; BlastX E value) |
---|---|---|---|---|---|
Embra180-120 | 1 | + | No significant match | ||
EUCeSSR0755-266 | 6 | + | No significant match | ||
EUCeSSR0755-276 | 6 | + | + | + | |
EUCeSSR1044-406 | 10 | + | Zinc finger, C3HC4 type (RING finger) protein (Medicago truncatula; 5E-69) | ||
Embra394-215 | 10 | + | Predicted: thionin-like protein 2 (Eucalyptus grandis; 7E-34) | ||
EUCeSSR0849-212 | 11 | + | Predicted: uncharacterized protein LOC104426570 (Eucalyptus grandis; 2E-26) | ||
EUCeSSR0849-232 | 11 | + |
†Scaffolds as aligned to E. grandis genome sequence (version 1.1, http://www.phytozome.net/eucalyptus.php). A plus sign (+) indicates the significant association detected by both G and Wald tests. MAT, mean annual temperature; MAP, mean annual precipitation.