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. 2016 Oct 17;6:34343. doi: 10.1038/srep34343

Table 1. Properties of data partitions used in this study and tree statistics.

Data matrix Number of sequences New reported sequences Number of aligned positions Number of informative substitutions Number of indels Number of informative indels Proportion of missing data Tree length Consistency index (CI) Retention index (RI) Model
matK 202 54 1578 613 19 10 25.54% 2384 0.53 0.87 TVM + I + G
ndhF 160 83 2108 765 23 9 19.13% 3891 0.43 0.75 GTR + I + G
rbcL 170 59 1400 251 2 0 11.57% 1282 0.34 0.75 TVM + I + G
rps16 181 57 926 375 89 56 1.62% 1602 0.55 0.88 GTR + G
trnL-F 259 88 918 398 123 64 1.67% 1801 0.52 0.88 GTR + G
D270 270   6930 2402 256 139 39.65% 11084 0.47 0.83 GTR + I + G
D155 155   6930 2168 218 123 23.51% 9381 0.51 0.80 GTR + I + G