Table 3.
Confidence | ROC area | Standard error | Min ROC area | ax ROC area | |
---|---|---|---|---|---|
UMD‐Predictor | 0.95 | 0.828 | 0.004 | 0.821 | 0.836 |
SIFT | 0.95 | 0.784 | 0.005 | 0.774 | 0.794 |
PPH2_VAR | 0.95 | 0.826 | 0.004 | 0.819 | 0.834 |
PROVEAN | 0.95 | 0.789 | 0.004 | 0.781 | 0.797 |
CONDEL | 0.95 | 0.778 | 0.004 | 0.771 | 0.786 |
MUT‐ASS | 0.95 | 0.813 | 0.004 | 0.806 | 0.820 |
CADD | 0.95 | 0.834 | 0.004 | 0.827 | 0.841 |
Min ROC area, lower bound for the confidence interval of a vector of length two; Max ROC area, upper bound for the confidence interval of a vector of length two. All data were generated using the “ci.cvAUC” function of the “cvAUC” package (https://github.com/ledell/cvAUC) for the ROCR R‐package [Sing et al., 2005]. UMD‐Predictor values were obtained without the mutations’ frequency information.