Table 1. Thermodynamic parameters for duplex formation determined from UV melting and DSC measurementsa,b.
Duplex | UV melting | DSC | |||
---|---|---|---|---|---|
Tm (°C) | Tm (°C) | ΔH° (kcal mol−1) | ΔS° (cal mol−1 K−1) | ΔG° (37°C) (kcal mol−1) | |
RNA1:RNA2 | 66.2 ± 0.2 | 53.9 ± 1.3 | −85.2 ± 3.1 | −263.2 ± 9.7 | −3.58 ± 0.37 |
thioRNA1:RNA2 | 74.5 ± 0.3 | 66.9 ± 0.1 | −100.8 ± 0.9 | −299.4 ± 2.8 | −7.90 ± 0.21 |
thioRNA1:thioRNA2 | >99 | 91.0 ± 0.6 | −126.9 ± 1.0 | −350.8 ± 3.2 | −18.1 ± 0.1 |
RNA1:DNA1 | 51.6 ± 0.1 | 43.9 ± 0.2 | −87.8 ± 2.2 | −279.5 ± 9.8 | −0.98 ± 0.99 |
thioRNA1:DNA1 | 45.5 ± 0.9 | 35.9 ± 0.1 | −61.7 ± 2.2 | −200.8 ± 14.3 | 3.31 ± 0.37 |
aErrors reflect standard deviation from three independent experiments.
bExperimental conditions are described in Materials and Methods.