TABLE 2.

qRT-PCR validation of RNA-Seq results

Gene ID	Gene namea	Expression fold change (ΔcidB mutant/UA159)
		RNA-Seq		qRT-PCR
		Anaerobic	Aerobic	Anaerobic	Aerobic
SMU_1363c	tpn	24.97	22.2	45.22	18.87
SMU_574c	lrgB	1.2	3.78	1.79	1.99
SMU_1396	gbpC	1.25		1.51
SMU_1914c	cipB	0.82		0.93
SMU_423	nlmD	0.74		0.82
SMU_490	pflC	0.46		0.55
SMU_1752	NA	0.4		0.5
SMU_191	NA	0.19		0.13
SMU_40	NA		7.08		1.43
SMU_1421	pdhC		3.55		1.92
SMU_609	NA		3.33		1.68
SMU_41	NA		3.2		3.02
SMU_82	dnaK		2.54		1.39
SMU_925	cipI		0.64		0.39
SMU_508	NA		0.45		0.44
SMU_940c	patB		0.44		0.38

^aNA, not available.