TABLE 2.
Virus-Fab contacts identified from the final modelsa
| VP2 protein and CPV residue | B5A8 residue | van der Waals | Hydrogen | Polar | Hydrophobic | Proximity |
|---|---|---|---|---|---|---|
| 1 | ||||||
| Arg 81 | Asp 155 | x | x | |||
| Asn 85 | Leu 204 | x | ||||
| Met 87 | Leu 204 | x | ||||
| Tyr 206 | x | x | x | |||
| Asp 88 | Tyr 206 | x | ||||
| Ala 91 | Tyr 206 | x | ||||
| Ile101 | Leu 204 | x | ||||
| Asn 231 | Leu 204 | x | ||||
| Ile 232 | Gly 203 | x | ||||
| Tyr 233 | Leu 204 | x | ||||
| Gly 203 | x | |||||
| His 234 | Pro 202 | x | ||||
| Gly 235 | Pro 202 | x | ||||
| Leu 131 | x | |||||
| Val 151 | x | |||||
| Thr 236 | Leu 131 | x | ||||
| Asp 237 | Leu 131 | x | ||||
| 2 | ||||||
| Pro 123 | Trp 153 | x | ||||
| Lys 387 | Trp 153 | x | x | |||
| Asn 154 | x | |||||
| Thr 390 | Asn 161 | x | ||||
| Thr 391 | Asn 161 | x | ||||
| Asn 554 | Ile 170 | x | ||||
| Val 555 | Leu 168 | x | ||||
| Ile 170 | x | |||||
| Asp 556 | Met 152 | x | ||||
| Arg 167 | x | |||||
| Leu 168 | x | |||||
| Asn 557 | Met 152 | x | ||||
| Gln 558 | Ser 131 | x | x | |||
| Val 151 | x | |||||
| Met 152 | x | |||||
| Phe 559 | Met 152 | x | ||||
| Trp 153 | x | |||||
| Asn 154 | x | |||||
| Asp 155 | x | |||||
| Asn 560 | Met 152 | x | ||||
| Trp 153 | x | x | ||||
| Tyr 561 | Trp 153 | x | x | |||
| Asn 154 | x | |||||
| Val 562 | Trp 153 | x | ||||
| Asn 154 | x | |||||
| Pro 563 | Asn 154 | x | ||||
| Ser 564 | Asn 154 | x | x | x | ||
| Asn 565 | Asp 155 | x | ||||
| Gly 568 | Asn 154 | x | ||||
| Lys 570 | Met 152 | x | ||||
| Trp 153 | x | x | ||||
| 3 | ||||||
| Gly 299 | Tyr 92* | x | ||||
| Asp 155 | x | |||||
| Gly 156 | x | |||||
| Asp 157 | x | |||||
| Ala 300 | Tyr 92* | x | ||||
| Asp 155 | x | |||||
| Gly 156 | x | x | ||||
| Asp 157 | x | |||||
| Glu 200 | x | |||||
| Leu 201 | x | |||||
| Thr 301 | Tyr 92* | x | ||||
| Glu 200 | x | |||||
| Asn 302 | Tyr 92* | x | ||||
| Trp 545 | Trp 153 | x | x | |||
| Asn 546 | Trp 153 | x |
Three copies of the VP2 capsid protein are listed with the Fab contacts that were identified by a distance of 4 Å. *, location on light chain of the Fab.