Table 2. The average difference in M-values in regions consistently differentially methylated in all three prefrontal cortex data sets.
| Chr | Average ΔM (HBSFRC) | Average ΔM (LBBND) | Average ΔM (DBCBB) | Nearest gene |
|---|---|---|---|---|
| chr5 | 0.351 | 0.153 | 0.306 | PRDM9 |
| chr6 | 0.314 | 0.240 | 0.267 | DPPA5 |
| chr6 | 0.394 | 0.219 | 0.318 | DDX43 |
| chr6 | −0.263 | −0.156 | −0.191 | LY6G5C |
| chr10 | 0.365 | 0.286 | 0.241 | PFKP |
| chr14 | −0.368 | −0.129 | −0.150 | REC8 |
| chr15 | 0.715 | 0.269 | 0.301 | CERS3 |
Abbreviations: DBCBB, Douglas Bell-Canada Brain Bank; HBSFRC, Human Brain and Spinal Fluid Resource Centre; LBBND, London Brain Bank for Neurodegenerative Disorders.