Table 1.
The detailed information of SlBBX members.
| Gene | Annotated CDS | Genomic position | Chr | CDS | AA | pIs | MW | Subcellular localization |
|---|---|---|---|---|---|---|---|---|
| SlBBX1 | Solyc02g089520.1 | 45892058-45893830 | 2 | 1230 | 409 | 5.07 | 45.67 | nucl: 12, chlo: 1 |
| SlBBX2 | Solyc02g089500.2 | 45885737-45886444 | 2 | 429 | 142 | 8.50 | 15.18 | nucl: 6, mito: 5, chlo: 1, cyto: 1 |
| SlBBX3 | Solyc02g089540.2 | 45900821-45903523 | 2 | 1176 | 391 | 5.57 | 43.43 | nucl: 10, chlo: 2, cyto: 2 |
| SlBBX4 | Solyc08g006530.2 | 1142836-1144790 | 8 | 1050 | 349 | 5.28 | 38.65 | nucl: 8, chlo: 3, cyto: 3 |
| SlBBX5 | Solyc12g096500.1 | 63736405-63737572 | 12 | 1077 | 358 | 5.53 | 39.50 | chlo: 10, nucl:3 |
| SlBBX6 | Solyc07g006630.2 | 1494827-1496702 | 7 | 1161 | 386 | 6.36 | 42.60 | chlo: 7, cyto: 4, nucl: 1, mito: 1 |
| SlBBX7 | Solyc12g006240.1 | 756961-761422 | 12 | 810 | 269 | 4.49 | 29.70 | nucl: 9, chlo: 3, mito: 1 |
| SlBBX8 | Solyc05g020020.2 | 25874229-25879668 | 5 | 1233 | 410 | 5.50 | 44.52 | nucl: 11, cyto: 2 |
| SlBBX9 | Solyc07g045180.2 | 55614263-55620975 | 7 | 1257 | 418 | 5.41 | 46.13 | nucl: 14 |
| SlBBX10 | Solyc05g046040.1 | 57316966-57319191 | 5 | 1260 | 419 | 4.97 | 46.26 | nucl: 11, mito: 1, E.R.: 1 |
| SlBBX11 | Solyc09g074560.2 | 61872048-61874336 | 9 | 1122 | 373 | 5.80 | 42.20 | nucl: 9, cyto: 3, chlo: 1 |
| SlBBX12 | Solyc05g024010.2 | 30237066-30240376 | 5 | 1359 | 452 | 6.79 | 49.70 | nucl: 11, cyto: 1, extr: 1 |
| SlBBX13 | Solyc04g007210.2 | 904265-906430 | 4 | 1287 | 428 | 5.33 | 48.71 | nucl: 11, chlo: 1, mito: 1 |
| SlBBX14 | Solyc03g119540.2 | 62171978-62173730 | 3 | 1227 | 408 | 5.17 | 46.69 | nucl: 11, chlo: 1, mito: 1 |
| SlBBX15 | Solyc05g009310.2 | 3442971-3445112 | 5 | 1314 | 437 | 5.53 | 49.81 | nucl: 7, chlo: 3, mito: 2, cyto: 1 |
| SlBBX16 | Solyc12g005750.1 | 400112-400441 | 12 | 330 | 110 | 7.99 | 12.88 | cyto: 8, nucl: 3, chlo: 1, mito: 1 |
| SlBBX17 | Solyc07g052620.1 | 58408926-58409318 | 7 | 393 | 130 | 8.58 | 14.51 | nucl: 8, chlo: 3, cyto: 2 |
| SlBBX18 | Solyc02g084420.2 | 42107507-42109459 | 2 | 267 | 88 | 5.47 | 9.57 | cyto: 12, chlo: 1 |
| SlBBX19 | Solyc01g110370.2 | 88848214-88852895 | 1 | 726 | 241 | 5.31 | 26.87 | cyto: 6.5, cyto_nucl: 5.5, nucl: 3.5, chlo: 1, plas: 1, cysk: 1 |
| SlBBX20 | Solyc12g089240.1 | 62792418-62794690 | 12 | 990 | 329 | 7.04 | 36.39 | nucl: 10, chlo: 2, chlo: 1 |
| SlBBX21 | Solyc04g081020.2 | 62677396-62678694 | 4 | 900 | 299 | 7.51 | 33.25 | nucl: 7, cyto: 4, extr: 2 |
| SlBBX22 | Solyc07g062160.2 | 62191788-62196800 | 7 | 897 | 311 | 4.89 | 33.66 | nucl: 10, chlo: 3 |
| SlBBX23 | Solyc12g005420.1 | 251564-253391 | 12 | 849 | 282 | 5.87 | 30.63 | chlo: 9, nucl: 4 |
| SlBBX24 | Solyc06g073180.2 | 41479688-41483031 | 6 | 702 | 233 | 4.97 | 25.91 | nucl: 6, cyto: 4, chlo: 1, plas: 1, extr: 1 |
| SlBBX25 | Solyc01g110180.2 | 88706256-88707726 | 1 | 612 | 203 | 5.63 | 22.62 | nucl: 9, cyto: 2, extr: 2 |
| SlBBX26 | Solyc10g006750.2 | 1205986-1206786 | 10 | 315 | 104 | 9.39 | 12.03 | nucl: 10.5, cyto_nucl: 6.5, cyto: 1.5 |
| SlBBX27 | Solyc04g007470.2 | 1146534-1149345 | 4 | 1428 | 475 | 5.66 | 53.13 | nucl: 14 |
| SlBBX28 | Solyc12g005660.1 | 351057-351746 | 12 | 609 | 202 | 4.89 | 22.26 | chlo: 8, nucl: 2, cyto: 2, extr: 2 |
| SlBBX29 | Solyc02g079430.2 | 38574418-38575502 | 2 | 558 | 185 | 4.72 | 20.72 | nucl: 9, chlo: 2, cyto: 1, plas: 1 |
Chr, chromosome; CDS, length of coding sequence; AA, number of amino acid; pIs, theoretical isoelectric point; MW, molecular weight, KDa; The subcellular location of tomato BBX proteins was predicted using WoLF PSORT (http://www.genscript.com/psort/wolf_psort.html). Nucl, nucleus; Mito, mitochondria; Chlo, chloroplast; Cyto, cytosol; E.R, endoplasmic reticulum; Cysk, cytoskeleton; Plas, plasma membrane; Extr, extracellular. Testk used for kNN is: 14.