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. 2016 Mar 14;211(2):527–541. doi: 10.1111/nph.13912

Table 1.

Summary of conserved Fusarium graminearum (Fg) transcription factor (TF) regulators homologous to those in Saccharomyces cerevisiae (Sc)

Fg TF regulators Fg degenerate TFBS Sc homologs Sc TFBS evidence Consensus function annotation Motif matching score
FGSG_04666 CGGTGAR CHA4 No Cell cycle a
FGSG_07097 CNCCAAN YOX1 Yes Cell cycle control 0.51
FGSG_07924 CGACNNC ZNF1 No Cell cycle, cell component biosynthesis, cell differentiation, signal transduction
FGSG_07310 CCCTGNN STE12 Yes Cell cycle, cytokinesis, mating, cell type differentiation, stress response 0.92
FGSG_09807 YGCGACN CEF1 No Cell cycle, RNA processing, mRNA splicing
FGSG_08349 NGTSACG UME6 Yes Cell cycle, transcription, cell transport 0.57
FGSG_00385 CCNCNTC NHP6B Yes Chromatin remodeling, condensation
FGSG_08719 NGCCNCA MYO1 No Cytoplasmic and nuclear protein degradation, cell cycle, cytoskeleton structure
FGSG_07789 ATCGATA SKO1 Yes Disease, virulence, defense 0.53
FGSG_00477 GNCCCRC MIG2 Yes Fungal cell differentiation 1
FGSG_00318 CCCCGSA BAS1 Yes Metabolism, energy, transport 0.71
FGSG_00717 AAAANTT TIM10 No Mitochondria, mitochondria transport, heat shock stress response
FGSG_09892 GATGNCN MPE1 No mRNA synthesis, transcriptional control
FGSG_00153 ATAAGAT PUT3 Yes Nitrogen utilization 0.98
FGSG_04480 NNAAAAA EDS1 Yes Nonvesicular transport, stress response 1
FGSG_00800 CCNCCNC HAL9 Yes Osmotic and salt stress response, stress response 1
FGSG_13172 CNCNCCA PIP2 Yes Oxidation of fatty acids, cell cycle and DNA processing 1
FGSG_06516 GCKGACT STB5 Yes Oxygen and radical detoxification 1
FGSG_01172 CCGAGGY OAF1 Yes Peroxisome, fatty acid, mitochondria 1
FGSG_01411 NNCGCGT PFA4 No Protein modification, degradation, cell cycle regulation
FGSG_06220 GNGGGGY SUI2 No Protein synthesis, translation, translation initiation
FGSG_05012 AGCTNCN ARC1 No Protein synthesis, tRNA aminoacylation, tRNA binding, stress response
FGSG_00052 CAYGTGC RSC30 Yes Regulation of ribosomal protein genes 0.83
FGSG_04554 YNATTGG DPS1 No RNA modification, rRNA processing
FGSG_06168 RAAAAAN RSF2 Yes rRNA processing, protein synthesis, transcription 0.84
FGSG_11996 ACGTMAT ECM22 Yes Sterol metabolism 0.62
FGSG_00713 NCTCCCN STB5 Yes Stress response 0.61
FGSG_12798 TATAAGA PPR1 Yes Stress response 0.86
FGSG_02696 NACGTCA PPR1 Yes Stress response 0.84
FGSG_02787 GCGGRGN STB5 Yes Stress response 1
FGSG_04293 CNCCGMC CRZ1 Yes Stress response, calcium binding 0.97
FGSG_01638 GCGNCAN HAP1 Yes Transcription regulation 0.64
FGSG_00324 CNCCCNC SNT1 No Transcription, chromatin regulation, meiosis
FGSG_05498 GANGCGN BUR6 No Transcription, chromosomal cycle

TFBS, transcription factor binding site.

a

Score not calculated.