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. 2016 Oct 19;9:65. doi: 10.1186/s12920-016-0225-2

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© The Author(s). 2016

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 2 — Scatterplot of the second vs. first principal component (PC2 vs PC1) for the 54 Affymetrix FFPE samples. The 15 “bad” samples (with low PC1 scores) are colored red and were excluded from subsequent analyses. Each sample was labeled using the last 3 digits of its name (barcode)