Table 2.

Oligonucleotides

Name	Sequence (5′–3′)
GFP_f	AGGACAGCGTGATCTTCACC
GFP_r	CTTGAAGTGCATGTGGCTGT
upstream_f	CGTACTCCACCTCACCCATC
upstream_r	TTCATCGATACCGTCGACCT
TSR_f	CAAAGAAGCAAAAGCTGTTCCTTA
TSR_r	GCTGGAGTACAACATCTTCTTCTTGAC
160JvA	CTAAGGTAGCGAAGGCAATGCTACCAAATAC
161JvA	GACCGTTATAGTTATTTAAATTGTTTAACTTGG
AR152	ACACTCTTTCCCTACACGACGCTCTTCCGATCT
168_JvA	/5′phos/NNNNNNNNNNNNNNNNNNNNGATCATGCTAGTTGTGGTTTGTC
169_JvA	AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTCAGTGAAAAAAATGCTT
151AR	AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT
219AR	GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTCTAAGGTGTATGTAAACTTCCGACTTCAACTG
iPCR indexing	CAAGCAGAAGACGGCATACGAGATNNNNNNGTGACTGGAGTTCAGACGTGTGCTCTTCCGATC
Library indexing	CAAGCAGAAGACGGCATACGAGATNNNNNNGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTGCACGCCTTCAAGACCCCCATCGCC
DamID adapter top	CTAATACGACTCACTATAGGGCAGCGTGGTCGCGGCCGAGGA
DamID adapter bottom	TCCTCGGCCGCG
Adr-PCR-Rand1	NNNNGTGGTCGCGGCCGAGGATC
Y-adaptor top	ACACTCTTTCCCTACACGACGCTCTTCCGATCT
Y-adaptor bottom	/5′phos/GATCGGAAGAGCACACGTCT
Illumina index	CAAGCAGAAGACGGCATACGAGNNNNNNNNGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT
P5-Illumina-2	AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT
45JvA	ATTCTGATATTTCACATTCTTAAAATAAAGTGG
94JvA	ACCGTTATAGTTATTAACTTGGGTCAAACATTT