TABLE 1 .
Metagenomic deep sequencing resultsa
| Sample | Total no. of sequencing reads | No. of unique nonhuman reads | Target virus | Other viral sequence(s) | Bacterial sequence |
|---|---|---|---|---|---|
| EBOV | 47,328,387 | 17,777,406 | EBOV (3,342,624) | None | Mycoplasma hyorhinis (12,215,655) |
| rMV | 7,129,497 | 802,549 | MV (159,184) | HHV4 (905) | Negative |
| rHRSV | 6,274,384 | 1,165,688 | HRSV (673,096) | HPV18 (121) | Negative |
| LACV | 6,217,368 | 1,389,113 | LACV (1,122,903) | LCMV (5,388), Syrian hamster IAP H10 (45), hamster gammaretrovirus (11) | Mycoplasma arginini (23,919) |
| rCDV | 6,165,559 | 900,609 | CDV (582,074) | Fowlpox (1,138), LACV (7) | Negative |
| VSV | 10,164,946 | 2,130,521 | VSV (1,481,456) | LCMV (3,315) | Negative |
a
Number of sequences aligning to each microbe are in parentheses. Abbreviations: EBOV, Ebola virus; rMV, recombinant measles virus; HHV4, human herpesvirus 4; rHRSV, recombinant human respiratory syncytial virus; LACV, La Crosse virus; HPV18, human papillomavirus 18; IAP, intracisternal A particle; LCMV, lymphocytic choriomeningitis virus; rCDV, recombinant canine distemper virus; VSV, vesicular stomatitis virus.