TABLE.
Target Sequences Used to Design Custom CodeSet for nCounter Gene Expression Assay
| Gene | GenBank Accession no. | Target sequence |
|---|---|---|
| Arg1 | NM_053336.2 | ACGGGAAGGTAATCATAAGCCAGAGACTGACTACCTTAAACCACCGAAATAAATGTGAATACATCGCATAAAAGTCATCTGGGGCATCACAGCAAACCGA |
| Ccl22 | NM_057203.1 | TACATCCGTCACCCTCTGCCACCACGTTTCGTGAAGGAGTTCTACTGGACCTCAAAGTCCTGCCGCAAGCCTGGCGTCGTTTTGATAACCATCAAGAACC |
| Cd68 | NM_001031638.1 | CTCTCATTCCCTTACGGACAGCTTACCTTTGGATTCAAACAGGACCGACATCAGAGCCACAGTACAGTCTACCTTAACTACATGGCAGTGGAATACAATG |
| Cd163 | NM_001107887.1 | AGTTTCCTCAAGAGGAGAGGTCTTGATACATCAAGTTCAGTACCAAGAGATGGATTCGAAGACGGATGATCTGGACTTGCTGAAATCCTCGGGTTGGCAT |
| Cd200r1 | NM_023953.1 | CTGCTTTTGGAGAACTTCTCACGTAGCAGTACTCTTGATCTGGGGGGTCTTCGCGGCTGAGTCAAGTTGTCCTGATAAGAATCAAACAATGCAGAACAAT |
| Chi3l3 (Ym1) | NM_001191712.1 | AAGCGTTTGAGAAAGAATCTACTGAGCAAGAAATCCCAAGGCTGCTTCTCACTGCCACAGTAGCTGGAGTCATTGACACAATCCAGTCTGGTTACAAGAT |
| Cx3cr1 | NM_133534.1 | ATGTGCAAGCTCACGACTGCTTTCTTCTTCATTGGCTTCTTTGGGGGCATATTCTTCATCACCGTCATCAGCATCGACCGGTACCTCGCCATCGTCCTGG |
| Gfap | NM_017009.1 | TACAGACTTTCTCCAACCTCCAGATCCGAGAAACCAGCCTGGACACCAAATCTGTGTCAGAAGGCCACCTCAAGAGGAACATCGTGGTAAAGACGGTGGA |
| Hmox1 (HO-1) | NM_012580.2 | CTAGTTCATCCCAGACACCGCTCCTGCGATGGGTCCTCACACTCAGTTTCCTGTTGGCGACCGTGGCAGTGGGAATTTATGCCATGTAAATGCAGTGTTG |
| Hprt1 | NM_012583.2 | AGCTTCCTCCTCAGACCGCTTTTCCCGCGAGCCGACCGGTTCTGTCATGTCGACCCTCAGTCCCAGCGTCGTGATTAGTGATGATGAACCAGGTTATGAC |
| Il6 | NM_012589.1 | GGAACAGCTATGAAGTTTCTCTCCGCAAGAGACTTCCAGCCAGTTGCCTTCTTGGGACTGATGTTGTTGACAGCCACTGCCTTCCCTACTTCACAAGTCC |
| Il4r | NM_133380.2 | GGGTGTCAGCATCTCCTGCATCTGCATCCTATTGTTTTGCCTGACCTGTTACTTCAGCATTATCAAGATTAAGAAGATATGGTGGGACCAGATTCCCACT |
| Itgam (Cd11b) | NM_012711.1 | CATCCCTTCCTTCAACAGTAAAGAAATATTCAACGTCACCCTCCAGGGCAATCTGCTATTTGACTGGTACATCGAGACTTCTCATGACCACCTCCTGCTT |
| Mrc1 (Cd206) | NM_001106123.1 | CTTTGGAATCAAGGGCACAGAGCTATATTTTAACTATGGCAACAGGCAAGAAAAGAATATCAAGCTTTACAAAGGTTCCGGTTTGTGGAGCAGATGGAAG |
| Nos2 | NM_012611.2 | ACGGGACACAGTGTCGCTGGTTTGAAACTTCTCAGCCACCTTGGTGAGGGGACTGGACTTTTAGAGACGCTTCTGAGGTTCCTCAGGCTTGGGTCTTGTT |
| Pparg | NM_013124.1 | TTTATAGCTGTCATTATTCTCAGTGGAGACCGCCCAGGCTTGCTGAACGTGAAGCCCATCGAGGACATCCAAGACAACCTGCTGCAGGCCCTGGAACTCC |
| Sdha | NM_130428.1 | CCTCCGATTAAGGCAAATGCTGGAGAAGAGTCGGTTATGAATCTTGACAAGTTGAGATTTGCTGATGGAAGTGTAAGAACATCAGAGCTGCGCCTCAGCA |
| Stat6 | NM_001044250.1 | GTGGTTTGATGGTGTCCTGGACCTCACTAAACGCTGTCTTCGGAGCTACTGGTCAGATCGGCTGATCATCGGCTTTATCAGTAAGCAATATGTCACTAGC |
| Tgfb1 | NM_021578.2 | CGCCTGCAGAGATTCAAGTCAACTGTGGAGCAACACGTAGAACTCTACCAGAAATATAGCAACAATTCCTGGCGTTACCTTGGTAACCGGCTGCTGACCC |
| Tlr2 | NM_198769.2 | TTTACAAACCCTTAGGGTAGGAAATGTTGACACTTTCAGTGAGATAAGGAGAATAGATTTTGCTGGGCTGACCTCTCTCAACGAACTTGAAATTCAGGTA |
| Tlr4 | NM_019178.1 | GTCAGTGTGCTTGTGGTAGCCACTGTAGCATTTCTGATATACCACTTCTATTTTCACCTGATACTTATTGCTGGCTGTAAAAAGTACAGCAGAGGAGAAA |
| Tnf | NM_012675.2 | GGTGATCGGTCCCAACAAGGAGGAGAAGTTCCCAAATGGGCTCCCTCTCATCAGTTCCATGGCCCAGACCCTCACACTCAGATCATCTTCTCAAAACTCG |
| Vegfa | NM_001110334.1 | GTGACCAAGCACGGTGGTCCCTCGTGGAACTGGATTCGCCATTTTCTTATATTTGCTGCTAAATCGCCAAGCCCGGAAGATTAGGGAGTTTTGTTTCTGG |
| Ywhaz | NM_013011.3 | TCCTGAACTCCCCAGAGAAAGCCTGCTCTCTTGCAAAAACAGCTTTTGATGAAGCCATTGCTGAACTTGATACATTAAGTGAAGAGTCGTACAAAGACAG |