Table 1. Primers and probes used in multiplex real-time PCR to detect RSV-A, RSV-B, and human ACTB.
Target a | Primers and probes | Sequences b |
---|---|---|
RSV-A | ||
Forward | 5’-ACTGCAATCAYACAAGATGCAACRA-3’ | |
Reverse | 5’-CAGATTGRAGAAGCTGATTCCA-3’ | |
Probe | 5’-FAM-CCAGATCAAGAACACAACCCCARCATACCT-BHQ1-3’ | |
RSV-B | ||
Forward | 5’-ACTTACCTTACTCAAGTCTCACCAGAAA-3’ | |
Reverse | 5’-TTGTRGCTGARTTTGTGTGGAT-3’ | |
Probe | 5’-Texas red-TTAGCCCATCCMAACAAYCCACAACC-BHQ2-3’ | |
Human beta actin | ||
Forward | 5’-TGGCACCCAGCACAATGA-3’ | |
Reverse | 5’-GCCGATCCACACGGAGTACT-3’ | |
Probe | 5’-JOE-ATCAAGATCATTGCTCCTCCTGAGCGC-BHQ1-3’ |
Note:
a Conserved G gene specific for RSV-A and RSV-B, and human ACTB gene were used for detection.
b TaqMan probes were used; Y represents C or T; R represents A or G; M represents A or C.