Table 2. Specific primer sequences used in the study (N = 13).
Locus | Fluorescence label | Primer Sequence (5'-3') | |
---|---|---|---|
ISAG Panel | |||
BM1824 | NED | Forward | GAG CAA GGT GTT TTT CCA ATC |
Chr 1/178-192 bp | Reverse | CAT TCT CCA ACT GCT TCC TTG | |
BM2113 | FAM | Forward | GCT GCC TTC TAC CAA ATA CCC |
Chr 2/123-143 bp | Reverse | CTT CCT GAG AGA AGC AAC ACC | |
INRA023 | HEX | Forward | GAG TAG AGC TAC AAG ATA AAC TTC |
Chr 3/197-223 bp | Reverse | TAA CTA CAG GGT GTT AGA TGA ACT C | |
SPS115 | FAM | Forward | AAA GTG ACA CAA CAG CTT CTC CAG |
Chr 15/240-270 bp | Reverse | AAC GAG TGT CCT AGT TTG GCT GTG | |
TGLA122 | HEX | Forward | CCC TCC TCC AGG TAA ATC AGC |
Chr 21/137-181 bp | Reverse (1) | AAT CAC ATG GCA AAT AAG TAC ATA C | |
Reverse (2) | AAT CAC ATG GCA AAT AAG TAC ATA | ||
TGLA126 | HEX | Forward | CTA ATT TAG AAT GAG AGA GGC TTC T |
Chr 20/116-122 bp | Reverse | TTG GTC TCT ATT CTC TGA ATA TTC C | |
TGLA227 | FAM | Forward | CGA ATT CCA AAT CTG TTA ATT TGC T |
Chr 18/76-102 bp | Reverse | ACA GAC AGA AAC TCA ATG AAA GCA | |
ETH10 | FAM | Forward | GTT CAG GAC TGG CCC TGC TAA CA |
Chr 5/212-224 bp | Reverse | CCT CCA GCC CAC TTT CTC TTC TC | |
ETH225 | NED | Forward | GAT CAC CTT GCC ACT ATT TCC T |
Chr 9/141-159 bp | Reverse | ACA TGA CAG CCA GCT GCT ACT | |
ETH3 | NED | Forward | GAA CCT GCC TCT CCT GCA TTG G |
Chr 19/105-125 bp | Reverse | ACT CTG CCT GTG GCC AAG TAG G | |
TGLA53 | FAM | Forward | GCT TTC AGA AAT AGT TTG CAT TCA |
Chr 16/152-186 bp | Reverse | ATC TTC ACA TGA TAT TAC AGC AGA | |
BM1818 | HEX | Forward | AGC TGG GAA TAT AAC CAA AGG |
Chr 23/253-272 bp | Reverse | AGT GCT TTC AAG GTC CAT GC | |
Additional primer sequences (NCBI) | |||
CSRM60 | HEX | Forward | AAG ATG TGA TCC AAG AGA GAG GCA |
Chr 10/96-116 bp | Reverse | AGG ACC AGA TCG TGA AAG GCA TAG |
Legend: ISAG: International Society for Animal Genetics; NCBI: National Center for Biotechnology Information.