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. 2016 Oct 20;11(10):e0165176. doi: 10.1371/journal.pone.0165176

Table 5. Distribution of the cpSSRs present in the U. reniformis cp coding regions.

cpSSR type Genes Pseudogenes
mono-repeats accD, atpB, atpF, ccsA, clpP, matK, petA,psaA, psaI, psbB, psbC, psbF, psbK, psbT, rpl14, rpl20, rpl2, rpl22, rpoA, rpoB, rpoC1, rpoC2, rps11, rps3, rps8, ycf1, and ycf2 ycf68, orf56, ndhA, ndhB, ndhD, ndhI and ndhG
di-repeats petA (AT), psaA (TC), rpoB (TA), rpoC2 (AT), and ycf2 (TA) ndhB (AG)
tri-repeat (TTC) psbC
compound/polymorphic ccsA, psaA, rpl32, rpoC2, rps4, rps7, rps14, rps15, rps18, rps19, ycf1, and ycf2 ndhA and ndhI