Table 1.
Services for data processing and analysis (Additional file 2)
Service group | Capabilities (web services) |
---|---|
General purpose, including mapping and visualization | General-purpose capabilities needed in many situations, such as for: Interactive visualization of spatio-temporal data (BioSTIF) e.g., occurrence data; Execution of R programs embedded as steps in workflows; Temporary workspace for data file movements between services |
Ecological niche modelling | Built up from the existing openModeller web service [28] to offer a wide range of algorithms and modelling procedures integrated with geospatial management of environmental data, enabling researchers to create, test, and project ecological niche models (ENM) |
Ecosystem modelling | A basic toolbox for studies of carbon sequestration and ecosystem function. It includes data-model integration and calibration services, model testing and Monte Carlo Experiment services, ecosystem valuation services, and bioclimatic services |
Metagenomics | A basic set of services for studying community structure and function from metagenomic ecological datasets. It includes services for geo-referenced annotation, metadata services, taxonomic binning and classification services, metagenomic traits services, and services for multivariate analysis |
Phylogenetics | Services to enable DNA sequence mining and alignment, core phylogenetic inference, tree visualization, and phylogenetic community structure, for broad use in evolutionary and ecological studies |
Population modelling | Services for demographic data and their integration into matrix projection models and integral projection models (MPM, IPM) |
Taxonomy | Services for taxonomic name resolution, checklists and classification, and species occurrence data retrieval |