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. 2016 Oct 21;17:820. doi: 10.1186/s12864-016-3150-z

Table 3.

Genes identified in superscaffolds and their transcriptomic evidence

Superscaffold Gene No. Gene (protein) name CDS length Reference accession Fgenesh + score Positives (%) Transcriptomic evidence
1 1 DNA-binding domain protein 684 XP_003624562.1 975.49 77.98 ang, alb
1 2 LanFTc1 525 LanFTc1 966.60 100.00 ang
1 3 uncharacterized protein 492 XP_006603704.1 498.86 83.07 ang, alb, lut
1 4 apyrase 2-like 1407 XP_006598985.1 1916.76 95.51 ang, alb, lut
2 1 U-box domain-containing protein 2208 XP_006580498.1 2276.42 87.66 alb
2 2 acetyl-CoA carboxylase biotin carboxylase subunit 1614 XP_003630608.2 2159.24 91.81 ang, alb, lut
2 3 uncharacterized protein 2934 XP_006580493.1 2851.19 79.84 ang, alb
2 4 ethanolamine-phosphate cytidylyltransferase 1191 XP_006580492.1 1552.44 88.81 ang, alb, lut
2 5 galacturonokinase-like 1317 XP_006580491.1 1561.85 88.13 ang, alb, lut
2 6 LanFTc2 528 LanFTc2 978.98 100.00 ang, alb, lut

Abbreviations: ang, L. angustifolius; alb, L. albus; lut, L. luteus